Difference between revisions of "TSS:Hg 132915.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ICD= | |ICD= | ||
| − | |all_trans=ENST00000299314. | + | |all_trans=ENST00000299314.12:0 NM_024312:0 AM085438:73 ENST00000392919.4:84 BC002779:84 BC094884:84 AY687932:85 ENST00000549940.5:109 BC071687:109 BC131787:129 AK056137:195 ENST00000549165.1:248 KJ903160:252 KR709938:252 ENST00000647144.1:264 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=10 |
|end=101830972 | |end=101830972 | ||
|end_of_center_position=101830950 | |end_of_center_position=101830950 | ||
|entrez_id=79158 | |entrez_id=79158 | ||
|gc_percent=0.825871 | |gc_percent=0.825871 | ||
| − | |gene_alias=GNPTA | + | |gene_alias=GNPTA{{!}}ICD |
| − | |gene_description=N-acetylglucosamine-1-phosphate transferase alpha and beta | + | |gene_description=N-acetylglucosamine-1-phosphate transferase subunits alpha and beta |
|gene_id=79158 | |gene_id=79158 | ||
| − | |gene_name=N-acetylglucosamine-1-phosphate transferase alpha and beta | + | |gene_name=N-acetylglucosamine-1-phosphate transferase subunits alpha and beta |
|gene_source=HGNC:29670 | |gene_source=HGNC:29670 | ||
|gene_symbol=GNPTAB | |gene_symbol=GNPTAB | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_024312 | |nearest_refseq=NM_024312 | ||
|nearest_unigene=Hs.46850 | |nearest_unigene=Hs.46850 | ||
| − | |num_trans= | + | |num_trans=15 |
|species=human | |species=human | ||
|start=101830926 | |start=101830926 | ||
|start_of_center_position=101830949 | |start_of_center_position=101830949 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000299314. | + | |transcript_name=ENST00000299314.12 NM_024312 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_132915.1 | |tss_id=hg_132915.1 | ||
Revision as of 04:53, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101830949 |
|---|---|
| End of the center position in the TSS region: | 101830950 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000299314.12 NM_024312 |
|---|---|
| Distance: | 0 |
| Num_trans: | 15 |
| All_trans: | ENST00000299314.12:0 NM_024312:0 AM085438:73 ENST00000392919.4:84 BC002779:84 BC094884:84 AY687932:85 ENST00000549940.5:109 BC071687:109 BC131787:129 AK056137:195 ENST00000549165.1:248 KJ903160:252 KR709938:252 ENST00000647144.1:264 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_024312 |
| Entrez ID: | 79158 |
| Nearest Unigene: | Hs.46850 |
| Nearest Refseq: | NM_024312 |
| Nearest Ensembl: | ENSG00000111670 |
| Gene Name: | N-acetylglucosamine-1-phosphate transferase subunits alpha and beta |
| Gene Alias: | GNPTA|ICD |
| Gene Description: | N-acetylglucosamine-1-phosphate transferase subunits alpha and beta |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.825871 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
