Difference between revisions of "TSS:Hg 134457.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|PABPL3= | |PABPL3= | ||
| − | |all_trans=AF132026:-10 DQ895297:13 DQ892103:13 KJ897288:13 BC027617:-14 BC045608:-24 AK313336:-28 AL136900:-31 | + | |all_trans=AF132026:-10 DQ895297:13 DQ892103:13 KJ897288:13 BC027617:-14 BC045608:-24 AK313336:-28 AL136900:-31 ENST00000281589.5:-50 NM_030979:-50 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 10: | Line 10: | ||
|entrez_id=5042 | |entrez_id=5042 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=PABP3 | + | |gene_alias=PABP3{{!}}PABPL3{{!}}tPABP |
|gene_description=poly(A) binding protein cytoplasmic 3 | |gene_description=poly(A) binding protein cytoplasmic 3 | ||
|gene_id=5042 | |gene_id=5042 | ||
| − | |gene_name= | + | |gene_name=poly(A) binding protein cytoplasmic 3 |
|gene_source=HGNC:8556 | |gene_source=HGNC:8556 | ||
|gene_symbol=PABPC3 | |gene_symbol=PABPC3 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_030979 | |nearest_refseq=NM_030979 | ||
|nearest_unigene=Hs.458280 | |nearest_unigene=Hs.458280 | ||
| − | |num_trans= | + | |num_trans=10 |
|species=human | |species=human | ||
|start=25096185 | |start=25096185 | ||
Revision as of 05:29, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 25096185 |
|---|---|
| End of the center position in the TSS region: | 25096186 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AF132026 |
|---|---|
| Distance: | -10 |
| Num_trans: | 10 |
| All_trans: | AF132026:-10 DQ895297:13 DQ892103:13 KJ897288:13 BC027617:-14 BC045608:-24 AK313336:-28 AL136900:-31 ENST00000281589.5:-50 NM_030979:-50 |
TATA-Box annotation
| Distance to TSS: | 48 |
|---|---|
| Nearest PromoterID: | NM_030979 |
| Entrez ID: | 5042 |
| Nearest Unigene: | Hs.458280 |
| Nearest Refseq: | NM_030979 |
| Nearest Ensembl: | ENSG00000151846 |
| Gene Name: | poly(A) binding protein cytoplasmic 3 |
| Gene Alias: | PABP3|PABPL3|tPABP |
| Gene Description: | poly(A) binding protein cytoplasmic 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
