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Difference between revisions of "TSS:Hg 134512.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|L21=
 
|L21=
|all_trans=ENST00000473558.5:-78 uc058waf.1:-78 NM_000982:104 ENST00000461690.5:110 uc058wag.1:110 L25348:118 ENST00000272274.8:128 uc058wah.1:128 ENST00000311549.10:-131 uc001ura.4:-131 ENST00000319826.8:132 uc058wai.1:132 ENST00000326092.8:146 uc058waj.1:146
+
|all_trans=ENST00000473558.5:-78 NM_000982:104 ENST00000461690.5:110 L25348:118 ENST00000272274.8:128 ENST00000311549.10:-131 ENST00000319826.8:132 ENST00000326092.8:146
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.075
 
|cpg_percent=0.075
Line 10: Line 10:
 
|entrez_id=6144
 
|entrez_id=6144
 
|gc_percent=0.567164
 
|gc_percent=0.567164
|gene_alias=HYPT12
+
|gene_alias=HYPT12{{!}}L21
 
|gene_description=ribosomal protein L21
 
|gene_description=ribosomal protein L21
 
|gene_id=6144
 
|gene_id=6144
Line 23: Line 23:
 
|nearest_refseq=NM_000982
 
|nearest_refseq=NM_000982
 
|nearest_unigene=Hs.381123
 
|nearest_unigene=Hs.381123
|num_trans=14
+
|num_trans=8
 
|species=human
 
|species=human
 
|start=27251439
 
|start=27251439
 
|start_of_center_position=27251445
 
|start_of_center_position=27251445
 
|strand=+
 
|strand=+
|transcript_name=ENST00000473558.5 uc058waf.1
+
|transcript_name=ENST00000473558.5
 
|tss_classification=yes
 
|tss_classification=yes
 
|tss_id=hg_134512.1
 
|tss_id=hg_134512.1

Revision as of 05:30, 16 June 2021

Basic information about the TSS


TSS ID:hg_134512.1
Species:human
Chr:chr13
TSS Classification:yes
Start:27251439
End:27251451
Strand:+
TSS Score:1
Start of the center position in the TSS region:27251445
End of the center position in the TSS region:27251446



Gene and protein annotation


Transcript_name:ENST00000473558.5
Distance:-78
GeneID:6144
HGNC/MGI_ID:HGNC:10313
UniProt_ID:
Gene_name:ribosomal protein L21
Gene_symbol:RPL21
Gene_synonyms:DKFZp686C06101 FLJ27458 L21 MGC104274 MGC104275 MGC71252
Gene_source:HGNC:10313



Transcript annotation


Transcript_name:ENST00000473558.5
Distance:-78
Num_trans:8
All_trans:ENST00000473558.5:-78 NM_000982:104 ENST00000461690.5:110 L25348:118 ENST00000272274.8:128 ENST00000311549.10:-131 ENST00000319826.8:132 ENST00000326092.8:146



TATA-Box annotation


Distance to TSS:-110
Nearest PromoterID:NM_000982
Entrez ID:6144
Nearest Unigene:Hs.381123
Nearest Refseq:NM_000982
Nearest Ensembl:ENSG00000122026
Gene Name:ribosomal protein L21
Gene Alias:HYPT12|L21
Gene Description:ribosomal protein L21
Gene Type:protein-coding
CpG%:0.075
GC%:0.567164
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):