Difference between revisions of "TSS:Hg 134513.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|L21= | |L21= | ||
| − | |all_trans=ENST00000461690.5:0 NM_000982 | + | |all_trans=ENST00000461690.5:0 NM_000982:0 L25348:3 ENST00000272274.8:13 ENST00000319826.8:17 ENST00000326092.8:31 ENST00000473558.5:-184 ENST00000311549.10:-237 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 10: | Line 10: | ||
|entrez_id=6144 | |entrez_id=6144 | ||
|gc_percent=0.651741 | |gc_percent=0.651741 | ||
| − | |gene_alias=HYPT12 | + | |gene_alias=HYPT12{{!}}L21 |
|gene_description=ribosomal protein L21 | |gene_description=ribosomal protein L21 | ||
|gene_id=6144 | |gene_id=6144 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_000982 | |nearest_refseq=NM_000982 | ||
|nearest_unigene=Hs.381123 | |nearest_unigene=Hs.381123 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=27251545 | |start=27251545 | ||
|start_of_center_position=27251555 | |start_of_center_position=27251555 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000461690.5 NM_000982 | + | |transcript_name=ENST00000461690.5 NM_000982 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_134513.1 | |tss_id=hg_134513.1 | ||
Revision as of 05:30, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27251555 |
|---|---|
| End of the center position in the TSS region: | 27251556 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000461690.5 NM_000982 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000461690.5:0 NM_000982:0 L25348:3 ENST00000272274.8:13 ENST00000319826.8:17 ENST00000326092.8:31 ENST00000473558.5:-184 ENST00000311549.10:-237 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_000982 |
| Entrez ID: | 6144 |
| Nearest Unigene: | Hs.381123 |
| Nearest Refseq: | NM_000982 |
| Nearest Ensembl: | ENSG00000122026 |
| Gene Name: | ribosomal protein L21 |
| Gene Alias: | HYPT12|L21 |
| Gene Description: | ribosomal protein L21 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
