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Difference between revisions of "TSS:Hg 134524.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 
|TFIIIA=
 
|TFIIIA=
|all_trans=U14134:0 U20272:0 AB590496:-1 ENST00000466776.5:19 uc058waz.1:19 ENST00000438571.5:-59 uc058way.1:-59 ENST00000419181.5:-73 uc058wax.1:-73 ENST00000435781.5:-97 uc058waw.1:-97 ENST00000439403.5:-191 ENST00000381140.8:-191 NM_002097:-191 uc058wau.1:-191 uc058wav.1:-191 D32257:-191 BC143711:-257
+
|all_trans=U14134:0 U20272:0 AB590496:-1 ENST00000466776.5:19 ENST00000438571.5:-59 ENST00000419181.5:-73 ENST00000435781.5:-97 ENST00000381140.10:-116 NM_002097:-116 D32257:-191 BC143711:-257
 
|chr=chr13
 
|chr=chr13
 
|cpg_percent=0.16
 
|cpg_percent=0.16
 
|distance=0
 
|distance=0
|distance_to_tss=197
+
|distance_to_tss=122
 
|end=27424747
 
|end=27424747
 
|end_of_center_position=27424741
 
|end_of_center_position=27424741
 
|entrez_id=2971
 
|entrez_id=2971
 
|gc_percent=0.761194
 
|gc_percent=0.761194
|gene_alias=AP2
+
|gene_alias=AP2{{!}}TFIIIA
 
|gene_description=general transcription factor IIIA
 
|gene_description=general transcription factor IIIA
 
|gene_id=2971
 
|gene_id=2971
Line 23: Line 23:
 
|nearest_refseq=NM_002097
 
|nearest_refseq=NM_002097
 
|nearest_unigene=Hs.445977
 
|nearest_unigene=Hs.445977
|num_trans=18
+
|num_trans=11
 
|species=human
 
|species=human
 
|start=27424734
 
|start=27424734

Revision as of 05:30, 16 June 2021

Basic information about the TSS


TSS ID:hg_134524.1
Species:human
Chr:chr13
TSS Classification:yes
Start:27424734
End:27424747
Strand:+
TSS Score:1
Start of the center position in the TSS region:27424740
End of the center position in the TSS region:27424741



Gene and protein annotation


Transcript_name:U14134 U20272
Distance:0
GeneID:2971
HGNC/MGI_ID:HGNC:4662
UniProt_ID:
Gene_name:general transcription factor IIIA
Gene_symbol:GTF3A
Gene_synonyms:AP2 TFIIIA
Gene_source:HGNC:4662



Transcript annotation


Transcript_name:U14134 U20272
Distance:0
Num_trans:11
All_trans:U14134:0 U20272:0 AB590496:-1 ENST00000466776.5:19 ENST00000438571.5:-59 ENST00000419181.5:-73 ENST00000435781.5:-97 ENST00000381140.10:-116 NM_002097:-116 D32257:-191 BC143711:-257



TATA-Box annotation


Distance to TSS:122
Nearest PromoterID:NM_002097
Entrez ID:2971
Nearest Unigene:Hs.445977
Nearest Refseq:NM_002097
Nearest Ensembl:ENSG00000122034
Gene Name:general transcription factor IIIA
Gene Alias:AP2|TFIIIA
Gene Description:general transcription factor IIIA
Gene Type:protein-coding
CpG%:0.16
GC%:0.761194
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):