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Difference between revisions of "TSS:Hg 134750.1"

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Line 5: Line 5:
 
|cpg_percent=0.085
 
|cpg_percent=0.085
 
|distance=291
 
|distance=291
|distance_to_tss=5493
+
|distance_to_tss=5487
 
|end=35471219
 
|end=35471219
 
|end_of_center_position=35471203
 
|end_of_center_position=35471203
 
|entrez_id=4081
 
|entrez_id=4081
 
|gc_percent=0.676617
 
|gc_percent=0.676617
|gene_alias=CAGR1
+
|gene_alias=CAGR1{{!}}Nbla00126
 
|gene_description=mab-21 like 1
 
|gene_description=mab-21 like 1
 
|gene_id=26960
 
|gene_id=26960

Revision as of 05:35, 16 June 2021

Basic information about the TSS


TSS ID:hg_134750.1
Species:human
Chr:chr13
TSS Classification:yes
Start:35471185
End:35471219
Strand:+
TSS Score:1
Start of the center position in the TSS region:35471202
End of the center position in the TSS region:35471203



Gene and protein annotation


Transcript_name:AK297773
Distance:291
GeneID:26960
HGNC/MGI_ID:HGNC:7648
UniProt_ID:B7Z4S7
Gene_name:neurobeachin
Gene_symbol:NBEA
Gene_synonyms:BCL8B FLJ10197 KIAA1544 LYST2
Gene_source:HGNC:7648



Transcript annotation


Transcript_name:AK297773
Distance:291
Num_trans:1
All_trans:AK297773:291



TATA-Box annotation


Distance to TSS:5487
Nearest PromoterID:NM_005584
Entrez ID:4081
Nearest Unigene:Hs.584776
Nearest Refseq:NM_005584
Nearest Ensembl:ENSG00000180660
Gene Name:neurobeachin
Gene Alias:CAGR1|Nbla00126
Gene Description:mab-21 like 1
Gene Type:protein-coding
CpG%:0.085
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):