Difference between revisions of "TSS:Hg 136494.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000460973.5:0 ENST00000493719.5:0 ENST00000485959.5:0 ENST00000464753.1 | + | |all_trans=ENST00000460973.5:0 ENST00000493719.5:0 ENST00000485959.5:0 ENST00000464753.1:0 NM_001166261:0 NM_001166262:0 LF384075:0 MA619652:0 BC039599:0 ENST00000461838.5:2 DQ575760:-91 ENST00000471771.5:92 ENST00000381116.5:-360 ENST00000381120.8:-360 AF265440:-360 BC046166:-370 ENST00000484342.2:-383 ENST00000485650.5:-387 NM_152912:-398 NM_001166263:-398 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_152912 | |nearest_refseq=NM_152912 | ||
|nearest_unigene=Hs.534582 | |nearest_unigene=Hs.534582 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=27450132 | |start=27450132 | ||
|start_of_center_position=27450168 | |start_of_center_position=27450168 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000460973.5 ENST00000493719.5 ENST00000485959.5 ENST00000464753.1 NM_001166262 | + | |transcript_name=ENST00000460973.5 ENST00000493719.5 ENST00000485959.5 ENST00000464753.1 NM_001166261 NM_001166262 LF384075 MA619652 BC039599 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_136494.1 | |tss_id=hg_136494.1 | ||
Revision as of 06:15, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27450168 |
|---|---|
| End of the center position in the TSS region: | 27450169 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000460973.5 ENST00000493719.5 ENST00000485959.5 ENST00000464753.1 NM_001166261 NM_001166262 LF384075 MA619652 BC039599 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000460973.5:0 ENST00000493719.5:0 ENST00000485959.5:0 ENST00000464753.1:0 NM_001166261:0 NM_001166262:0 LF384075:0 MA619652:0 BC039599:0 ENST00000461838.5:2 DQ575760:-91 ENST00000471771.5:92 ENST00000381116.5:-360 ENST00000381120.8:-360 AF265440:-360 BC046166:-370 ENST00000484342.2:-383 ENST00000485650.5:-387 NM_152912:-398 NM_001166263:-398 |
TATA-Box annotation
| Distance to TSS: | 21 |
|---|---|
| Nearest PromoterID: | NM_001166262 |
| Entrez ID: | 219402 |
| Nearest Unigene: | Hs.534582 |
| Nearest Refseq: | NM_152912 |
| Nearest Ensembl: | ENSG00000122033 |
| Gene Name: | mitochondrial translational initiation factor 3 |
| Gene Alias: | IF3mt |
| Gene Description: | mitochondrial translational initiation factor 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
