Difference between revisions of "TSS:Hg 1366.1"
From referenceTSS
| Line 2: | Line 2: | ||
|APT2= | |APT2= | ||
|DJ886K2.4= | |DJ886K2.4= | ||
| − | |all_trans=ENST00000420982.5:0 ENST00000374505.6 | + | |all_trans=ENST00000420982.5:0 ENST00000374505.6:0 BC017034:0 BC017193:10 ENST00000495365.5:11 ENST00000374503.7:11 AF098668:-17 HM005316:-17 ENST00000374514.8:-28 NM_007260:-28 ENST00000374502.7:29 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=37 |
|end=23791192 | |end=23791192 | ||
|end_of_center_position=23791183 | |end_of_center_position=23791183 | ||
|entrez_id=11313 | |entrez_id=11313 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=APT-2 | + | |gene_alias=APT-2{{!}}APT2{{!}}DJ886K2.4 |
| − | |gene_description=lysophospholipase | + | |gene_description=lysophospholipase 2 |
|gene_id=11313 | |gene_id=11313 | ||
| − | |gene_name=lysophospholipase | + | |gene_name=lysophospholipase 2 |
|gene_source=HGNC:6738 | |gene_source=HGNC:6738 | ||
|gene_symbol=LYPLA2 | |gene_symbol=LYPLA2 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_007260 | |nearest_refseq=NM_007260 | ||
|nearest_unigene=Hs.533479 | |nearest_unigene=Hs.533479 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=23791172 | |start=23791172 | ||
|start_of_center_position=23791182 | |start_of_center_position=23791182 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000420982.5 ENST00000374505.6 | + | |transcript_name=ENST00000420982.5 ENST00000374505.6 BC017034 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_1366.1 | |tss_id=hg_1366.1 | ||
Revision as of 06:18, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23791182 |
|---|---|
| End of the center position in the TSS region: | 23791183 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000420982.5 ENST00000374505.6 BC017034 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000420982.5:0 ENST00000374505.6:0 BC017034:0 BC017193:10 ENST00000495365.5:11 ENST00000374503.7:11 AF098668:-17 HM005316:-17 ENST00000374514.8:-28 NM_007260:-28 ENST00000374502.7:29 |
TATA-Box annotation
| Distance to TSS: | 37 |
|---|---|
| Nearest PromoterID: | NM_007260 |
| Entrez ID: | 11313 |
| Nearest Unigene: | Hs.533479 |
| Nearest Refseq: | NM_007260 |
| Nearest Ensembl: | ENSG00000011009 |
| Gene Name: | lysophospholipase 2 |
| Gene Alias: | APT-2|APT2|DJ886K2.4 |
| Gene Description: | lysophospholipase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
