Difference between revisions of "TSS:Hg 1370.1"
From referenceTSS
| Line 2: | Line 2: | ||
|APT2= | |APT2= | ||
|DJ886K2.4= | |DJ886K2.4= | ||
| − | |all_trans=ENST00000374501 | + | |all_trans=ENST00000374501.1:-4 AK024724:61 ENST00000472213.1:425 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=-4 | |distance=-4 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2517 |
|end=23793667 | |end=23793667 | ||
|end_of_center_position=23793662 | |end_of_center_position=23793662 | ||
|entrez_id=11313 | |entrez_id=11313 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=APT-2 | + | |gene_alias=APT-2{{!}}APT2{{!}}DJ886K2.4 |
| − | |gene_description=lysophospholipase | + | |gene_description=lysophospholipase 2 |
|gene_id=11313 | |gene_id=11313 | ||
| − | |gene_name=lysophospholipase | + | |gene_name=lysophospholipase 2 |
|gene_source=HGNC:6738 | |gene_source=HGNC:6738 | ||
|gene_symbol=LYPLA2 | |gene_symbol=LYPLA2 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_007260 | |nearest_refseq=NM_007260 | ||
|nearest_unigene=Hs.533479 | |nearest_unigene=Hs.533479 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=23793656 | |start=23793656 | ||
|start_of_center_position=23793661 | |start_of_center_position=23793661 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000374501 | + | |transcript_name=ENST00000374501.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_1370.1 | |tss_id=hg_1370.1 | ||
Revision as of 06:27, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 23793661 |
|---|---|
| End of the center position in the TSS region: | 23793662 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000374501.1 |
|---|---|
| Distance: | -4 |
| Num_trans: | 3 |
| All_trans: | ENST00000374501.1:-4 AK024724:61 ENST00000472213.1:425 |
TATA-Box annotation
| Distance to TSS: | 2517 |
|---|---|
| Nearest PromoterID: | NM_007260 |
| Entrez ID: | 11313 |
| Nearest Unigene: | Hs.533479 |
| Nearest Refseq: | NM_007260 |
| Nearest Ensembl: | ENSG00000011009 |
| Gene Name: | lysophospholipase 2 |
| Gene Alias: | APT-2|APT2|DJ886K2.4 |
| Gene Description: | lysophospholipase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
