Difference between revisions of "TSS:Hg 138420.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|RPPH1-1= | |RPPH1-1= | ||
| − | |all_trans= | + | |all_trans=LF334325:-26 MA569902:-26 LF334326:105 MA569903:105 LF210043:-132 MA445620:-132 LF384983:349 MA620560:349 ENST00000250416.9:350 ENST00000529465.6:363 ENST00000429687.8:370 NM_005484:370 NM_001042618:370 AK300971:370 AK290079:370 ENST00000527915.5:372 AK001980:372 BC172288:375 AJ236912:375 AF085734:380 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance= | + | |distance=-26 |
|distance_to_tss=177 | |distance_to_tss=177 | ||
|end=20343265 | |end=20343265 | ||
| Line 10: | Line 10: | ||
|entrez_id=85495 | |entrez_id=85495 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=H1RNA | + | |gene_alias=H1RNA{{!}}RPPH1-1 |
|gene_description=ribonuclease P RNA component H1 | |gene_description=ribonuclease P RNA component H1 | ||
|gene_id=10038 | |gene_id=10038 | ||
| − | |gene_name= | + | |gene_name=RPPH1 |
|gene_source=HGNC:272 | |gene_source=HGNC:272 | ||
|gene_symbol=PARP2 | |gene_symbol=PARP2 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NR_002312 | |nearest_refseq=NR_002312 | ||
|nearest_unigene=Hs.613102 | |nearest_unigene=Hs.613102 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=20343203 | |start=20343203 | ||
|start_of_center_position=20343234 | |start_of_center_position=20343234 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF334325 MA569902 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_138420.1 | |tss_id=hg_138420.1 | ||
Latest revision as of 06:59, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 20343234 |
|---|---|
| End of the center position in the TSS region: | 20343235 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF334325 MA569902 |
|---|---|
| Distance: | -26 |
| Num_trans: | 20 |
| All_trans: | LF334325:-26 MA569902:-26 LF334326:105 MA569903:105 LF210043:-132 MA445620:-132 LF384983:349 MA620560:349 ENST00000250416.9:350 ENST00000529465.6:363 ENST00000429687.8:370 NM_005484:370 NM_001042618:370 AK300971:370 AK290079:370 ENST00000527915.5:372 AK001980:372 BC172288:375 AJ236912:375 AF085734:380 |
TATA-Box annotation
| Distance to TSS: | 177 |
|---|---|
| Nearest PromoterID: | NR_002312 |
| Entrez ID: | 85495 |
| Nearest Unigene: | Hs.613102 |
| Nearest Refseq: | NR_002312 |
| Nearest Ensembl: | ENSG00000277209 |
| Gene Name: | RPPH1 |
| Gene Alias: | H1RNA|RPPH1-1 |
| Gene Description: | ribonuclease P RNA component H1 |
| Gene Type: | ncRNA |
| CpG%: | 0.07 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
