Difference between revisions of "TSS:Hg 138464.1"
From referenceTSS
| Line 4: | Line 4: | ||
|HE3B= | |HE3B= | ||
|RAM2= | |RAM2= | ||
| − | |all_trans=ENST00000326783. | + | |all_trans=ENST00000326783.4:17 NM_022360:17 AY358865:40 BC128030:77 X76386:106 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=17 |
| − | |distance_to_tss=- | + | |distance_to_tss=-20 |
|end=20768387 | |end=20768387 | ||
|end_of_center_position=20768384 | |end_of_center_position=20768384 | ||
|entrez_id=64184 | |entrez_id=64184 | ||
|gc_percent=0.507463 | |gc_percent=0.507463 | ||
| − | |gene_alias=EP3B | + | |gene_alias=EP3B{{!}}FAM12B{{!}}HE3-BETA{{!}}HE3B{{!}}RAM2 |
|gene_description=epididymal protein 3B | |gene_description=epididymal protein 3B | ||
|gene_id=64184 | |gene_id=64184 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_022360 | |nearest_refseq=NM_022360 | ||
|nearest_unigene=Hs.525202 | |nearest_unigene=Hs.525202 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=20768380 | |start=20768380 | ||
|start_of_center_position=20768383 | |start_of_center_position=20768383 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000326783. | + | |transcript_name=ENST00000326783.4 NM_022360 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_138464.1 | |tss_id=hg_138464.1 | ||
Revision as of 07:00, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 20768383 |
|---|---|
| End of the center position in the TSS region: | 20768384 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000326783.4 NM_022360 |
|---|---|
| Distance: | 17 |
| Num_trans: | 5 |
| All_trans: | ENST00000326783.4:17 NM_022360:17 AY358865:40 BC128030:77 X76386:106 |
TATA-Box annotation
| Distance to TSS: | -20 |
|---|---|
| Nearest PromoterID: | NM_022360 |
| Entrez ID: | 64184 |
| Nearest Unigene: | Hs.525202 |
| Nearest Refseq: | NM_022360 |
| Nearest Ensembl: | ENSG00000181552 |
| Gene Name: | epididymal protein 3B |
| Gene Alias: | EP3B|FAM12B|HE3-BETA|HE3B|RAM2 |
| Gene Description: | epididymal protein 3B |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.507463 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
