Difference between revisions of "TSS:Hg 139305.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000556667.1 | + | |all_trans=ENST00000556667.1:77 NR_033240:215 BC012470:215 AK057476:292 BC040167:297 BC053597:311 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_033240 | |nearest_refseq=NR_033240 | ||
|nearest_unigene=Hs.601579 | |nearest_unigene=Hs.601579 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=37171807 | |start=37171807 | ||
|start_of_center_position=37171809 | |start_of_center_position=37171809 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-33(CCTTATTTAAGG,-,0.00) |
| − | |transcript_name=ENST00000556667.1 | + | |transcript_name=ENST00000556667.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_139305.1 | |tss_id=hg_139305.1 | ||
Revision as of 07:20, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 37171809 |
|---|---|
| End of the center position in the TSS region: | 37171810 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000556667.1 |
|---|---|
| Distance: | 77 |
| Num_trans: | 6 |
| All_trans: | ENST00000556667.1:77 NR_033240:215 BC012470:215 AK057476:292 BC040167:297 BC053597:311 |
TATA-Box annotation
| Distance to TSS: | -217 |
|---|---|
| Nearest PromoterID: | NR_033240 |
| Entrez ID: | 100129794 |
| Nearest Unigene: | Hs.601579 |
| Nearest Refseq: | NR_033240 |
| Nearest Ensembl: | ENSG00000258708 |
| Gene Name: | SLC25A21 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | SLC25A21 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.363184 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -33(CCTTATTTAAGG,-,0.00) |
