Difference between revisions of "TSS:Hg 13967.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|UNR= | |UNR= | ||
| − | |all_trans=BX648561:0 DQ591464:0 AF070542:51 AY049788:136 ENST00000438362.6 | + | |all_trans=BX648561:0 DQ591464:0 AF070542:51 AY049788:136 ENST00000438362.6:-147 CR749378:-147 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=7977 |
|end=114750043 | |end=114750043 | ||
|end_of_center_position=114750007 | |end_of_center_position=114750007 | ||
|entrez_id=7812 | |entrez_id=7812 | ||
|gc_percent=0.393035 | |gc_percent=0.393035 | ||
| − | |gene_alias=D1S155E | + | |gene_alias=D1S155E{{!}}UNR |
|gene_description=cold shock domain containing E1 | |gene_description=cold shock domain containing E1 | ||
|gene_id=7812 | |gene_id=7812 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:29905 | |hgnc_mgi_id=HGNC:29905 | ||
|nearest_ensembl=ENSG00000009307 | |nearest_ensembl=ENSG00000009307 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001007553 |
|nearest_refseq=NM_007158 | |nearest_refseq=NM_007158 | ||
|nearest_unigene=Hs.69855 | |nearest_unigene=Hs.69855 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=114749970 | |start=114749970 | ||
Revision as of 07:28, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 114750006 |
|---|---|
| End of the center position in the TSS region: | 114750007 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BX648561 DQ591464 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | BX648561:0 DQ591464:0 AF070542:51 AY049788:136 ENST00000438362.6:-147 CR749378:-147 |
TATA-Box annotation
| Distance to TSS: | 7977 |
|---|---|
| Nearest PromoterID: | NM_001007553 |
| Entrez ID: | 7812 |
| Nearest Unigene: | Hs.69855 |
| Nearest Refseq: | NM_007158 |
| Nearest Ensembl: | ENSG00000009307 |
| Gene Name: | cold shock domain containing E1 |
| Gene Alias: | D1S155E|UNR |
| Gene Description: | cold shock domain containing E1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.393035 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
