Difference between revisions of "TSS:Hg 140405.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000256367. | + | |all_trans=D86980:332 ENST00000256367.3:461 NM_015351:461 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_110071 | |nearest_refseq=NR_110071 | ||
|nearest_unigene=Hs.737532 | |nearest_unigene=Hs.737532 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=70641444 | |start=70641444 | ||
|start_of_center_position=70641449 | |start_of_center_position=70641449 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-13(CCCCTTAAAAAA,-,0.00) |
| − | |transcript_name= | + | |transcript_name=D86980 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_140405.1 | |tss_id=hg_140405.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 07:46, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 70641449 |
|---|---|
| End of the center position in the TSS region: | 70641450 |
Gene and protein annotation
|
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Transcript annotation
| Transcript_name: | D86980 |
|---|---|
| Distance: | 332 |
| Num_trans: | 3 |
| All_trans: | D86980:332 ENST00000256367.3:461 NM_015351:461 |
TATA-Box annotation
| Distance to TSS: | -152 |
|---|---|
| Nearest PromoterID: | NR_110071 |
| Entrez ID: | 101928075 |
| Nearest Unigene: | Hs.737532 |
| Nearest Refseq: | NR_110071 |
| Nearest Ensembl: | ENSG00000245466 |
| Gene Name: | tetratricopeptide repeat domain 9 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC101928075 |
| Gene Type: | ncRNA |
| CpG%: | 0.07 |
| GC%: | 0.552239 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -13(CCCCTTAAAAAA,-,0.00) |
