Difference between revisions of "TSS:Hg 140407.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000256367. | + | |all_trans=D86980:119 ENST00000256367.3:248 NM_015351:248 BC047950:297 AB464295:462 BC160145:462 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance=119 | |distance=119 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-257 |
|end=70641668 | |end=70641668 | ||
|end_of_center_position=70641660 | |end_of_center_position=70641660 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_015351 | |nearest_refseq=NM_015351 | ||
|nearest_unigene=Hs.79170 | |nearest_unigene=Hs.79170 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=70641650 | |start=70641650 | ||
|start_of_center_position=70641659 | |start_of_center_position=70641659 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=D86980 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_140407.1 | |tss_id=hg_140407.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 07:46, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 70641659 |
|---|---|
| End of the center position in the TSS region: | 70641660 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | D86980 |
|---|---|
| Distance: | 119 |
| Num_trans: | 6 |
| All_trans: | D86980:119 ENST00000256367.3:248 NM_015351:248 BC047950:297 AB464295:462 BC160145:462 |
TATA-Box annotation
| Distance to TSS: | -257 |
|---|---|
| Nearest PromoterID: | NM_015351 |
| Entrez ID: | 23508 |
| Nearest Unigene: | Hs.79170 |
| Nearest Refseq: | NM_015351 |
| Nearest Ensembl: | ENSG00000133985 |
| Gene Name: | tetratricopeptide repeat domain 9 |
| Gene Alias: | TTC9A |
| Gene Description: | tetratricopeptide repeat domain 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
