Difference between revisions of "TSS:Hg 141845.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ZNF925= | |ZNF925= | ||
| − | |all_trans=ENST00000555360.1:0 | + | |all_trans=ENST00000555360.1:0 NM_001370342:0 ENST00000342537.8:468 NM_001137601:468 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.185 | |cpg_percent=0.185 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=23 |
|end=104800633 | |end=104800633 | ||
|end_of_center_position=104800577 | |end_of_center_position=104800577 | ||
|entrez_id=100128927 | |entrez_id=100128927 | ||
|gc_percent=0.855721 | |gc_percent=0.855721 | ||
| − | |gene_alias=LCCS6 | + | |gene_alias=LCCS6{{!}}ZNF925 |
|gene_description=zinc finger and BTB domain containing 42 | |gene_description=zinc finger and BTB domain containing 42 | ||
|gene_id=100128927 | |gene_id=100128927 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:32550 | |hgnc_mgi_id=HGNC:32550 | ||
|nearest_ensembl=ENSG00000179627 | |nearest_ensembl=ENSG00000179627 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001370342 |
|nearest_refseq=NM_001137601 | |nearest_refseq=NM_001137601 | ||
|nearest_unigene=Hs.170853 | |nearest_unigene=Hs.170853 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=104800576 | |start_of_center_position=104800576 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000555360.1 | + | |transcript_name=ENST00000555360.1 NM_001370342 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_141845.1 | |tss_id=hg_141845.1 | ||
Revision as of 08:20, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 104800576 |
|---|---|
| End of the center position in the TSS region: | 104800577 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000555360.1 NM_001370342 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000555360.1:0 NM_001370342:0 ENST00000342537.8:468 NM_001137601:468 |
TATA-Box annotation
| Distance to TSS: | 23 |
|---|---|
| Nearest PromoterID: | NM_001370342 |
| Entrez ID: | 100128927 |
| Nearest Unigene: | Hs.170853 |
| Nearest Refseq: | NM_001137601 |
| Nearest Ensembl: | ENSG00000179627 |
| Gene Name: | zinc finger and BTB domain containing 42 |
| Gene Alias: | LCCS6|ZNF925 |
| Gene Description: | zinc finger and BTB domain containing 42 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.855721 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
