Difference between revisions of "TSS:Hg 141894.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000549030 | + | |all_trans=ENST00000549030.1:-190 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=-190 | |distance=-190 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-9724 |
|end=105388816 | |end=105388816 | ||
|end_of_center_position=105388814 | |end_of_center_position=105388814 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001195082 | |nearest_refseq=NM_001195082 | ||
|nearest_unigene=Hs.729499 | |nearest_unigene=Hs.729499 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=105388811 | |start=105388811 | ||
|start_of_center_position=105388813 | |start_of_center_position=105388813 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000549030 | + | |transcript_name=ENST00000549030.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_141894.1 | |tss_id=hg_141894.1 | ||
Revision as of 08:21, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 105388813 |
|---|---|
| End of the center position in the TSS region: | 105388814 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000549030.1 |
|---|---|
| Distance: | -190 |
| Num_trans: | 1 |
| All_trans: | ENST00000549030.1:-190 |
TATA-Box annotation
| Distance to TSS: | -9724 |
|---|---|
| Nearest PromoterID: | NM_001195082 |
| Entrez ID: | 647310 |
| Nearest Unigene: | Hs.729499 |
| Nearest Refseq: | NM_001195082 |
| Nearest Ensembl: | ENSG00000226174 |
| Gene Name: | phosphofurin acidic cluster sorting protein 2 |
| Gene Alias: | - |
| Gene Description: | testis expressed 22 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
