Difference between revisions of "TSS:Hg 144825.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000556163 | + | |all_trans=ENST00000556163.1:-143 ENST00000355909.7:-174 ENST00000554197.1:-174 NR_033943:-174 BX161483:-174 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=long intergenic non-protein coding RNA 2291 |
|gene_id=100129345 | |gene_id=100129345 | ||
| − | |gene_name= | + | |gene_name=long intergenic non-protein coding RNA 2291 |
| − | |gene_source= | + | |gene_source=HGNC:53207 |
| − | |gene_symbol= | + | |gene_symbol=LINC02291 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:53207 |
|nearest_ensembl=ENSG00000197176 | |nearest_ensembl=ENSG00000197176 | ||
|nearest_promoter_id=NR_033943 | |nearest_promoter_id=NR_033943 | ||
|nearest_refseq=NR_033943 | |nearest_refseq=NR_033943 | ||
|nearest_unigene=Hs.23632 | |nearest_unigene=Hs.23632 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=97686475 | |start=97686475 | ||
|start_of_center_position=97686479 | |start_of_center_position=97686479 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000556163 | + | |transcript_name=ENST00000556163.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_144825.1 | |tss_id=hg_144825.1 | ||
Revision as of 09:28, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 97686479 |
|---|---|
| End of the center position in the TSS region: | 97686480 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000556163.1 |
|---|---|
| Distance: | -143 |
| Num_trans: | 5 |
| All_trans: | ENST00000556163.1:-143 ENST00000355909.7:-174 ENST00000554197.1:-174 NR_033943:-174 BX161483:-174 |
TATA-Box annotation
| Distance to TSS: | 178 |
|---|---|
| Nearest PromoterID: | NR_033943 |
| Entrez ID: | 100129345 |
| Nearest Unigene: | Hs.23632 |
| Nearest Refseq: | NR_033943 |
| Nearest Ensembl: | ENSG00000197176 |
| Gene Name: | long intergenic non-protein coding RNA 2291 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2291 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
