Difference between revisions of "TSS:Hg 14815.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=BC143765:-258 | + | |all_trans=BC143765:-258 BC117210:-259 CR936667:290 AK074067:303 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
|distance=-258 | |distance=-258 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-438 |
|end=154501791 | |end=154501791 | ||
|end_of_center_position=154501782 | |end_of_center_position=154501782 | ||
| − | |entrez_id= | + | |entrez_id=126668 |
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=tudor domain containing 10 |
|gene_id=126669 | |gene_id=126669 | ||
|gene_name=Src homology 2 domain containing E | |gene_name=Src homology 2 domain containing E | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:27004 | |hgnc_mgi_id=HGNC:27004 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000163239 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_182499 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_182499 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.387671 |
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=154501771 | |start=154501771 | ||
Revision as of 10:46, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 154501781 |
|---|---|
| End of the center position in the TSS region: | 154501782 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC143765 |
|---|---|
| Distance: | -258 |
| Num_trans: | 4 |
| All_trans: | BC143765:-258 BC117210:-259 CR936667:290 AK074067:303 |
TATA-Box annotation
| Distance to TSS: | -438 |
|---|---|
| Nearest PromoterID: | NM_182499 |
| Entrez ID: | 126668 |
| Nearest Unigene: | Hs.387671 |
| Nearest Refseq: | NM_182499 |
| Nearest Ensembl: | ENSG00000163239 |
| Gene Name: | Src homology 2 domain containing E |
| Gene Alias: | - |
| Gene Description: | tudor domain containing 10 |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
