Difference between revisions of "TSS:Hg 14871.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SHCA= | |SHCA= | ||
| − | |all_trans=ENST00000414115.5 | + | |all_trans=ENST00000414115.5:-1 ENST00000444179.5:15 AB208849:308 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 10: | Line 10: | ||
|entrez_id=6464 | |entrez_id=6464 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=SHC | + | |gene_alias=SHC{{!}}SHCA |
|gene_description=SHC adaptor protein 1 | |gene_description=SHC adaptor protein 1 | ||
|gene_id=6464 | |gene_id=6464 | ||
| − | |gene_name=SHC | + | |gene_name=SHC adaptor protein 1 |
|gene_source=HGNC:10840 | |gene_source=HGNC:10840 | ||
|gene_symbol=SHC1 | |gene_symbol=SHC1 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:10840 | |hgnc_mgi_id=HGNC:10840 | ||
|nearest_ensembl=ENSG00000160691 | |nearest_ensembl=ENSG00000160691 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_183001 |
|nearest_refseq=NM_003029 | |nearest_refseq=NM_003029 | ||
|nearest_unigene=Hs.433795 | |nearest_unigene=Hs.433795 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=154968888 | |start=154968888 | ||
|start_of_center_position=154968890 | |start_of_center_position=154968890 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000414115.5 | + | |transcript_name=ENST00000414115.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_14871.1 | |tss_id=hg_14871.1 | ||
Revision as of 10:59, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 154968890 |
|---|---|
| End of the center position in the TSS region: | 154968891 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000414115.5 |
|---|---|
| Distance: | -1 |
| Num_trans: | 3 |
| All_trans: | ENST00000414115.5:-1 ENST00000444179.5:15 AB208849:308 |
TATA-Box annotation
| Distance to TSS: | 1857 |
|---|---|
| Nearest PromoterID: | NM_183001 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | SHC adaptor protein 1 |
| Gene Alias: | SHC|SHCA |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
