Difference between revisions of "TSS:Hg 14891.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SHCA= | |SHCA= | ||
| − | |all_trans=ENST00000368453.8:0 ENST00000368450.5:0 ENST00000366442.2:0 | + | |all_trans=ENST00000368453.8:0 ENST00000368450.5:0 ENST00000366442.2:0 NM_001202859:0 NM_003029:0 NM_001130041:0 BC014158:0 AK315842:0 AK130014:0 ENST00000412170.5:14 X68148:24 LP764911:-68 LP764913:-68 AK292143:-68 LF352245:-441 MA587822:-441 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-6 |
|end=154974415 | |end=154974415 | ||
|end_of_center_position=154974383 | |end_of_center_position=154974383 | ||
|entrez_id=6464 | |entrez_id=6464 | ||
|gc_percent=0.59204 | |gc_percent=0.59204 | ||
| − | |gene_alias=SHC | + | |gene_alias=SHC{{!}}SHCA |
|gene_description=SHC adaptor protein 1 | |gene_description=SHC adaptor protein 1 | ||
|gene_id=6464 | |gene_id=6464 | ||
| − | |gene_name=SHC | + | |gene_name=SHC adaptor protein 1 |
|gene_source=HGNC:10840 | |gene_source=HGNC:10840 | ||
|gene_symbol=SHC1 | |gene_symbol=SHC1 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:10840 | |hgnc_mgi_id=HGNC:10840 | ||
|nearest_ensembl=ENSG00000160691 | |nearest_ensembl=ENSG00000160691 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001202859 |
|nearest_refseq=NM_003029 | |nearest_refseq=NM_003029 | ||
|nearest_unigene=Hs.433795 | |nearest_unigene=Hs.433795 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=154974382 | |start_of_center_position=154974382 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000368453.8 ENST00000368450.5 ENST00000366442.2 | + | |transcript_name=ENST00000368453.8 ENST00000368450.5 ENST00000366442.2 NM_001202859 NM_003029 NM_001130041 BC014158 AK315842 AK130014 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_14891.1 | |tss_id=hg_14891.1 | ||
Revision as of 11:04, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 154974382 |
|---|---|
| End of the center position in the TSS region: | 154974383 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000368453.8 ENST00000368450.5 ENST00000366442.2 NM_001202859 NM_003029 NM_001130041 BC014158 AK315842 AK130014 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000368453.8:0 ENST00000368450.5:0 ENST00000366442.2:0 NM_001202859:0 NM_003029:0 NM_001130041:0 BC014158:0 AK315842:0 AK130014:0 ENST00000412170.5:14 X68148:24 LP764911:-68 LP764913:-68 AK292143:-68 LF352245:-441 MA587822:-441 |
TATA-Box annotation
| Distance to TSS: | -6 |
|---|---|
| Nearest PromoterID: | NM_001202859 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | SHC adaptor protein 1 |
| Gene Alias: | SHC|SHCA |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.59204 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
