Difference between revisions of "TSS:Hg 149151.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000558441.1 | + | |all_trans=ENST00000558441.1:178 AK093166:178 NR_109767:320 ENST00000560363.1:331 |
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| Line 12: | Line 12: | ||
|gene_description=uncharacterized LOC100131315 | |gene_description=uncharacterized LOC100131315 | ||
|gene_id=100131315 | |gene_id=100131315 | ||
| − | |gene_name= | + | |gene_name=GREM1 antisense RNA 1 |
| − | |gene_source= | + | |gene_source=HGNC:55411 |
| − | |gene_symbol= | + | |gene_symbol=GREM1-AS1 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| − | |hgnc_mgi_id= | + | |hgnc_mgi_id=HGNC:55411 |
|nearest_ensembl=ENSG00000259721 | |nearest_ensembl=ENSG00000259721 | ||
|nearest_promoter_id=NR_109767 | |nearest_promoter_id=NR_109767 | ||
|nearest_refseq=NR_109767 | |nearest_refseq=NR_109767 | ||
|nearest_unigene=Hs.610545 | |nearest_unigene=Hs.610545 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=32719184 | |start=32719184 | ||
|start_of_center_position=32719192 | |start_of_center_position=32719192 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000558441.1 | + | |transcript_name=ENST00000558441.1 AK093166 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_149151.1 | |tss_id=hg_149151.1 | ||
Revision as of 11:09, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 32719192 |
|---|---|
| End of the center position in the TSS region: | 32719193 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000558441.1 AK093166 |
|---|---|
| Distance: | 178 |
| Num_trans: | 4 |
| All_trans: | ENST00000558441.1:178 AK093166:178 NR_109767:320 ENST00000560363.1:331 |
TATA-Box annotation
| Distance to TSS: | -327 |
|---|---|
| Nearest PromoterID: | NR_109767 |
| Entrez ID: | 100131315 |
| Nearest Unigene: | Hs.610545 |
| Nearest Refseq: | NR_109767 |
| Nearest Ensembl: | ENSG00000259721 |
| Gene Name: | GREM1 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100131315 |
| Gene Type: | ncRNA |
| CpG%: | 0.065 |
| GC%: | 0.61194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
