Difference between revisions of "TSS:Hg 151902.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NM23H4= | |NM23H4= | ||
| − | |all_trans=ENST00000620944.4:11 ENST00000621774.4 | + | |all_trans=LP895315:0 ENST00000620944.4:11 ENST00000621774.4:11 NM_001286439:11 NM_001286433:11 BC017067:11 ENST00000448828.5:18 ENST00000219479.7:18 NM_001286438:18 NM_005009:18 NM_001286435:18 ENST00000444498.5:19 ENST00000460297.1:27 ENST00000382940.8:28 BC004880:28 Y07604:31 AB528678:41 KJ905838:41 JF432627:41 KJ905242:41 BT019438:42 ENST00000433358.5:56 ENST00000454619.5:-402 NM_001286436:-442 ENST00000397722.5:-446 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.175 | |cpg_percent=0.175 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-16 | |distance_to_tss=-16 | ||
|end=397181 | |end=397181 | ||
| Line 10: | Line 10: | ||
|entrez_id=4833 | |entrez_id=4833 | ||
|gc_percent=0.865672 | |gc_percent=0.865672 | ||
| − | |gene_alias=NDPK-D | + | |gene_alias=NDPK-D{{!}}NM23H4{{!}}nm23-H4 |
|gene_description=NME/NM23 nucleoside diphosphate kinase 4 | |gene_description=NME/NM23 nucleoside diphosphate kinase 4 | ||
|gene_id=4833 | |gene_id=4833 | ||
| − | |gene_name= | + | |gene_name=NME4 |
|gene_source=HGNC:7852 | |gene_source=HGNC:7852 | ||
|gene_symbol=NME4 | |gene_symbol=NME4 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:7852 | |hgnc_mgi_id=HGNC:7852 | ||
|nearest_ensembl=ENSG00000103202 | |nearest_ensembl=ENSG00000103202 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001286439 |
|nearest_refseq=NM_005009 | |nearest_refseq=NM_005009 | ||
|nearest_unigene=Hs.9235 | |nearest_unigene=Hs.9235 | ||
|nm23-H4= | |nm23-H4= | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=397170 | |start=397170 | ||
|start_of_center_position=397175 | |start_of_center_position=397175 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LP895315 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_151902.1 | |tss_id=hg_151902.1 | ||
Latest revision as of 12:13, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 397175 |
|---|---|
| End of the center position in the TSS region: | 397176 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LP895315 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | LP895315:0 ENST00000620944.4:11 ENST00000621774.4:11 NM_001286439:11 NM_001286433:11 BC017067:11 ENST00000448828.5:18 ENST00000219479.7:18 NM_001286438:18 NM_005009:18 NM_001286435:18 ENST00000444498.5:19 ENST00000460297.1:27 ENST00000382940.8:28 BC004880:28 Y07604:31 AB528678:41 KJ905838:41 JF432627:41 KJ905242:41 BT019438:42 ENST00000433358.5:56 ENST00000454619.5:-402 NM_001286436:-442 ENST00000397722.5:-446 |
TATA-Box annotation
| Distance to TSS: | -16 |
|---|---|
| Nearest PromoterID: | NM_001286439 |
| Entrez ID: | 4833 |
| Nearest Unigene: | Hs.9235 |
| Nearest Refseq: | NM_005009 |
| Nearest Ensembl: | ENSG00000103202 |
| Gene Name: | NME4 |
| Gene Alias: | NDPK-D|NM23H4|nm23-H4 |
| Gene Description: | NME/NM23 nucleoside diphosphate kinase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.865672 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
