Difference between revisions of "TSS:Hg 151907.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NM23H4= | |NM23H4= | ||
| − | |all_trans=ENST00000433358.5 | + | |all_trans=ENST00000433358.5:-31 BT019438:-45 AB528678:-46 KJ905838:-46 JF432627:-46 KJ905242:-46 Y07604:-56 ENST00000382940.8:-59 BC004880:-59 ENST00000460297.1:-60 ENST00000444498.5:-68 ENST00000448828.5:-69 ENST00000219479.7:-69 NM_001286438:-69 NM_005009:-69 NM_001286435:-69 ENST00000620944.4:-76 ENST00000621774.4:-76 NM_001286439:-76 NM_001286433:-76 BC017067:-76 LP895315:-88 ENST00000450036.1:470 NM_001286440:470 ENST00000454619.5:-499 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.18 | |cpg_percent=0.18 | ||
|distance=-31 | |distance=-31 | ||
| − | |distance_to_tss= | + | |distance_to_tss=71 |
|end=397272 | |end=397272 | ||
|end_of_center_position=397270 | |end_of_center_position=397270 | ||
|entrez_id=4833 | |entrez_id=4833 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| − | |gene_alias=NDPK-D | + | |gene_alias=NDPK-D{{!}}NM23H4{{!}}nm23-H4 |
|gene_description=NME/NM23 nucleoside diphosphate kinase 4 | |gene_description=NME/NM23 nucleoside diphosphate kinase 4 | ||
|gene_id=4833 | |gene_id=4833 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:7852 | |hgnc_mgi_id=HGNC:7852 | ||
|nearest_ensembl=ENSG00000103202 | |nearest_ensembl=ENSG00000103202 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001286435 |
|nearest_refseq=NM_005009 | |nearest_refseq=NM_005009 | ||
|nearest_unigene=Hs.9235 | |nearest_unigene=Hs.9235 | ||
|nm23-H4= | |nm23-H4= | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=397267 | |start=397267 | ||
|start_of_center_position=397269 | |start_of_center_position=397269 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000433358.5 | + | |transcript_name=ENST00000433358.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_151907.1 | |tss_id=hg_151907.1 | ||
Revision as of 12:13, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 397269 |
|---|---|
| End of the center position in the TSS region: | 397270 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000433358.5 |
|---|---|
| Distance: | -31 |
| Num_trans: | 25 |
| All_trans: | ENST00000433358.5:-31 BT019438:-45 AB528678:-46 KJ905838:-46 JF432627:-46 KJ905242:-46 Y07604:-56 ENST00000382940.8:-59 BC004880:-59 ENST00000460297.1:-60 ENST00000444498.5:-68 ENST00000448828.5:-69 ENST00000219479.7:-69 NM_001286438:-69 NM_005009:-69 NM_001286435:-69 ENST00000620944.4:-76 ENST00000621774.4:-76 NM_001286439:-76 NM_001286433:-76 BC017067:-76 LP895315:-88 ENST00000450036.1:470 NM_001286440:470 ENST00000454619.5:-499 |
TATA-Box annotation
| Distance to TSS: | 71 |
|---|---|
| Nearest PromoterID: | NM_001286435 |
| Entrez ID: | 4833 |
| Nearest Unigene: | Hs.9235 |
| Nearest Refseq: | NM_005009 |
| Nearest Ensembl: | ENSG00000103202 |
| Gene Name: | NME/NM23 nucleoside diphosphate kinase 4 |
| Gene Alias: | NDPK-D|NM23H4|nm23-H4 |
| Gene Description: | NME/NM23 nucleoside diphosphate kinase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.18 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
