Difference between revisions of "TSS:Hg 153318.1"
From referenceTSS
| Line 2: | Line 2: | ||
|IL-4RA= | |IL-4RA= | ||
|IL4RA= | |IL4RA= | ||
| − | |all_trans=ENST00000566117.5:162 | + | |all_trans=ENST00000566117.5:162 ENST00000562142.5:417 ENST00000561742.5:420 ENST00000563926.5:420 ENST00000543915.6:420 AK314863:420 LF384296:424 MA619873:424 ENST00000568746.5:428 AK303255:428 ENST00000566318.5:432 BC110343:455 ENST00000395762.7:468 NM_001257407:468 NM_000418:468 NM_001257406:468 NM_001257997:468 AK223591:485 ENST00000563002.5:486 X52425:491 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
|distance=162 | |distance=162 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-478 |
|end=27313506 | |end=27313506 | ||
|end_of_center_position=27313496 | |end_of_center_position=27313496 | ||
|entrez_id=3566 | |entrez_id=3566 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=CD124 | + | |gene_alias=CD124{{!}}IL-4RA{{!}}IL4RA |
|gene_description=interleukin 4 receptor | |gene_description=interleukin 4 receptor | ||
|gene_id=3566 | |gene_id=3566 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_000418 | |nearest_refseq=NM_000418 | ||
|nearest_unigene=Hs.513457 | |nearest_unigene=Hs.513457 | ||
| − | |num_trans= | + | |num_trans=20 |
|species=human | |species=human | ||
|start=27313485 | |start=27313485 | ||
|start_of_center_position=27313495 | |start_of_center_position=27313495 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000566117.5 | + | |transcript_name=ENST00000566117.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_153318.1 | |tss_id=hg_153318.1 | ||
Revision as of 12:45, 16 June 2021
Basic information about the TSS
|
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| Start of the center position in the TSS region: | 27313495 |
|---|---|
| End of the center position in the TSS region: | 27313496 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000566117.5 |
|---|---|
| Distance: | 162 |
| Num_trans: | 20 |
| All_trans: | ENST00000566117.5:162 ENST00000562142.5:417 ENST00000561742.5:420 ENST00000563926.5:420 ENST00000543915.6:420 AK314863:420 LF384296:424 MA619873:424 ENST00000568746.5:428 AK303255:428 ENST00000566318.5:432 BC110343:455 ENST00000395762.7:468 NM_001257407:468 NM_000418:468 NM_001257406:468 NM_001257997:468 AK223591:485 ENST00000563002.5:486 X52425:491 |
TATA-Box annotation
| Distance to TSS: | -478 |
|---|---|
| Nearest PromoterID: | NM_000418 |
| Entrez ID: | 3566 |
| Nearest Unigene: | Hs.513457 |
| Nearest Refseq: | NM_000418 |
| Nearest Ensembl: | ENSG00000077238 |
| Gene Name: | interleukin 4 receptor |
| Gene Alias: | CD124|IL-4RA|IL4RA |
| Gene Description: | interleukin 4 receptor |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
