Difference between revisions of "TSS:Hg 154417.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PB99= | |PB99= | ||
|PGR26= | |PGR26= | ||
| − | |all_trans=ENST00000568245.5 | + | |all_trans=ENST00000568245.5:0 BC064508:-10 AB049169:12 ENST00000565579.5:16 ENST00000333493.9:16 NM_001308360:16 NM_170776:16 AK310124:16 ENST00000450388.7:18 AK301258:18 AK172801:-24 ENST00000567991.5:27 BC044222:27 ENST00000565902.1:33 AY140959:58 KJ905050:64 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-27 |
|end=57668290 | |end=57668290 | ||
|end_of_center_position=57668280 | |end_of_center_position=57668280 | ||
|entrez_id=222487 | |entrez_id=222487 | ||
|gc_percent=0.671642 | |gc_percent=0.671642 | ||
| − | |gene_alias=GPR97 | + | |gene_alias=GPR97{{!}}PB99{{!}}PGR26 |
|gene_description=adhesion G protein-coupled receptor G3 | |gene_description=adhesion G protein-coupled receptor G3 | ||
|gene_id=222487 | |gene_id=222487 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_170776 | |nearest_refseq=NM_170776 | ||
|nearest_unigene=Hs.383403 | |nearest_unigene=Hs.383403 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=57668268 | |start=57668268 | ||
|start_of_center_position=57668279 | |start_of_center_position=57668279 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000568245.5 | + | |transcript_name=ENST00000568245.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_154417.1 | |tss_id=hg_154417.1 | ||
Revision as of 13:10, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 57668279 |
|---|---|
| End of the center position in the TSS region: | 57668280 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000568245.5 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000568245.5:0 BC064508:-10 AB049169:12 ENST00000565579.5:16 ENST00000333493.9:16 NM_001308360:16 NM_170776:16 AK310124:16 ENST00000450388.7:18 AK301258:18 AK172801:-24 ENST00000567991.5:27 BC044222:27 ENST00000565902.1:33 AY140959:58 KJ905050:64 |
TATA-Box annotation
| Distance to TSS: | -27 |
|---|---|
| Nearest PromoterID: | NM_001308360 |
| Entrez ID: | 222487 |
| Nearest Unigene: | Hs.383403 |
| Nearest Refseq: | NM_170776 |
| Nearest Ensembl: | ENSG00000182885 |
| Gene Name: | adhesion G protein-coupled receptor G3 |
| Gene Alias: | GPR97|PB99|PGR26 |
| Gene Description: | adhesion G protein-coupled receptor G3 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.671642 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
