Difference between revisions of "TSS:Hg 154418.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PB99= | |PB99= | ||
|PGR26= | |PGR26= | ||
| − | |all_trans=ENST00000565579.5:0 ENST00000450388.7:0 ENST00000567991.5:0 | + | |all_trans=ENST00000565579.5:0 ENST00000333493.9:0 ENST00000450388.7:0 ENST00000567991.5:0 NM_001308360:0 NM_170776:0 AB049169:0 AK310124:0 AK301258:0 BC044222:0 ENST00000565902.1:2 ENST00000568245.5:-22 AY140959:27 KJ905050:33 BC064508:-40 AK172801:-54 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=4 |
|end=57668321 | |end=57668321 | ||
|end_of_center_position=57668310 | |end_of_center_position=57668310 | ||
|entrez_id=222487 | |entrez_id=222487 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=GPR97 | + | |gene_alias=GPR97{{!}}PB99{{!}}PGR26 |
|gene_description=adhesion G protein-coupled receptor G3 | |gene_description=adhesion G protein-coupled receptor G3 | ||
|gene_id=222487 | |gene_id=222487 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:13728 | |hgnc_mgi_id=HGNC:13728 | ||
|nearest_ensembl=ENSG00000182885 | |nearest_ensembl=ENSG00000182885 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_170776 |
|nearest_refseq=NM_170776 | |nearest_refseq=NM_170776 | ||
|nearest_unigene=Hs.383403 | |nearest_unigene=Hs.383403 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=57668298 | |start=57668298 | ||
|start_of_center_position=57668309 | |start_of_center_position=57668309 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000565579.5 ENST00000450388.7 ENST00000567991.5 | + | |transcript_name=ENST00000565579.5 ENST00000333493.9 ENST00000450388.7 ENST00000567991.5 NM_001308360 NM_170776 AB049169 AK310124 AK301258 BC044222 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_154418.1 | |tss_id=hg_154418.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DVW2 F8W8F7 H3BRU4 | + | |uniprot_id=B4DVW2 F8W8F7 H3BRU4 Q86Y34 |
}} | }} | ||
Revision as of 13:10, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 57668309 |
|---|---|
| End of the center position in the TSS region: | 57668310 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000565579.5 ENST00000333493.9 ENST00000450388.7 ENST00000567991.5 NM_001308360 NM_170776 AB049169 AK310124 AK301258 BC044222 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | ENST00000565579.5:0 ENST00000333493.9:0 ENST00000450388.7:0 ENST00000567991.5:0 NM_001308360:0 NM_170776:0 AB049169:0 AK310124:0 AK301258:0 BC044222:0 ENST00000565902.1:2 ENST00000568245.5:-22 AY140959:27 KJ905050:33 BC064508:-40 AK172801:-54 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_170776 |
| Entrez ID: | 222487 |
| Nearest Unigene: | Hs.383403 |
| Nearest Refseq: | NM_170776 |
| Nearest Ensembl: | ENSG00000182885 |
| Gene Name: | adhesion G protein-coupled receptor G3 |
| Gene Alias: | GPR97|PB99|PGR26 |
| Gene Description: | adhesion G protein-coupled receptor G3 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
