Difference between revisions of "TSS:Hg 155642.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000562866.1:-15 NR_036480 | + | |all_trans=ENST00000562866.1:-15 NR_036480:-15 AK096286:-15 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 15: | Line 15: | ||
|gene_source=HGNC:48915 | |gene_source=HGNC:48915 | ||
|gene_symbol=VPS9D1-AS1 | |gene_symbol=VPS9D1-AS1 | ||
| − | |gene_synonyms= | + | |gene_synonyms=MYU |
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:48915 | |hgnc_mgi_id=HGNC:48915 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_036480 | |nearest_refseq=NR_036480 | ||
|nearest_unigene=Hs.666282 | |nearest_unigene=Hs.666282 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=89711870 | |start=89711870 | ||
|start_of_center_position=89711885 | |start_of_center_position=89711885 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000562866.1 NR_036480 | + | |transcript_name=ENST00000562866.1 NR_036480 AK096286 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_155642.1 | |tss_id=hg_155642.1 | ||
Revision as of 13:38, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 89711885 |
|---|---|
| End of the center position in the TSS region: | 89711886 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000562866.1 NR_036480 AK096286 |
|---|---|
| Distance: | -15 |
| Num_trans: | 3 |
| All_trans: | ENST00000562866.1:-15 NR_036480:-15 AK096286:-15 |
TATA-Box annotation
| Distance to TSS: | 30 |
|---|---|
| Nearest PromoterID: | NR_036480 |
| Entrez ID: | 100128881 |
| Nearest Unigene: | Hs.666282 |
| Nearest Refseq: | NR_036480 |
| Nearest Ensembl: | ENSG00000261373 |
| Gene Name: | VPS9D1 antisense RNA 1 |
| Gene Alias: | MYU |
| Gene Description: | VPS9D1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.075 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
