Difference between revisions of "TSS:Hg 155944.1"
From referenceTSS
| Line 5: | Line 5: | ||
|SRL300= | |SRL300= | ||
|SRm300= | |SRm300= | ||
| − | |all_trans=ENST00000570677.1:-245 | + | |all_trans=ENST00000570677.1:-245 ENST00000667280.1:-320 ENST00000573802.1:-327 NR_027275:-327 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
|distance=-245 | |distance=-245 | ||
| − | |distance_to_tss= | + | |distance_to_tss=344 |
|end=2752273 | |end=2752273 | ||
|end_of_center_position=2752257 | |end_of_center_position=2752257 | ||
| − | |entrez_id= | + | |entrez_id=100128788 |
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=SRRM2 antisense RNA 1 |
|gene_id=100128788 | |gene_id=100128788 | ||
|gene_name=SRRM2 antisense RNA 1 | |gene_name=SRRM2 antisense RNA 1 | ||
| Line 21: | Line 21: | ||
|gene_symbol=SRRM2-AS1 | |gene_symbol=SRRM2-AS1 | ||
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id=HGNC:44162 | |hgnc_mgi_id=HGNC:44162 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000205913 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_027275 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_027274 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.311208 |
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=2752239 | |start=2752239 | ||
|start_of_center_position=2752256 | |start_of_center_position=2752256 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000570677 | + | |transcript_name=ENST00000570677.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_155944.1 | |tss_id=hg_155944.1 | ||
Revision as of 13:45, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 2752256 |
|---|---|
| End of the center position in the TSS region: | 2752257 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000570677.1 |
|---|---|
| Distance: | -245 |
| Num_trans: | 4 |
| All_trans: | ENST00000570677.1:-245 ENST00000667280.1:-320 ENST00000573802.1:-327 NR_027275:-327 |
TATA-Box annotation
| Distance to TSS: | 344 |
|---|---|
| Nearest PromoterID: | NR_027275 |
| Entrez ID: | 100128788 |
| Nearest Unigene: | Hs.311208 |
| Nearest Refseq: | NR_027274 |
| Nearest Ensembl: | ENSG00000205913 |
| Gene Name: | SRRM2 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | SRRM2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.1 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
