Difference between revisions of "TSS:Hg 158136.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|FP977= | |FP977= | ||
| − | |all_trans=ENST00000262144. | + | |all_trans=NM_001324171:12 NM_001324172:12 ENST00000262144.11:35 NM_030581:35 LF384461:39 MA620038:39 ENST00000616369.4:75 BC004519:75 ENST00000564859.1:127 KJ903209:141 CU678744:141 ENST00000536050.5:332 AK302557:332 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| − | |distance= | + | |distance=12 |
|distance_to_tss=-17 | |distance_to_tss=-17 | ||
|end=74985168 | |end=74985168 | ||
| Line 10: | Line 10: | ||
|entrez_id=79726 | |entrez_id=79726 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=CDW12 | + | |gene_alias=CDW12{{!}}FP977{{!}}p90-120 |
|gene_description=WD repeat domain 59 | |gene_description=WD repeat domain 59 | ||
|gene_id=79726 | |gene_id=79726 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:25706 | |hgnc_mgi_id=HGNC:25706 | ||
|nearest_ensembl=ENSG00000103091 | |nearest_ensembl=ENSG00000103091 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001324171 |
|nearest_refseq=NM_030581 | |nearest_refseq=NM_030581 | ||
|nearest_unigene=Hs.280951 | |nearest_unigene=Hs.280951 | ||
| Line 29: | Line 29: | ||
|start_of_center_position=74985162 | |start_of_center_position=74985162 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001324171 NM_001324172 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_158136.1 | |tss_id=hg_158136.1 | ||
Revision as of 14:36, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 74985162 |
|---|---|
| End of the center position in the TSS region: | 74985163 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001324171 NM_001324172 |
|---|---|
| Distance: | 12 |
| Num_trans: | 13 |
| All_trans: | NM_001324171:12 NM_001324172:12 ENST00000262144.11:35 NM_030581:35 LF384461:39 MA620038:39 ENST00000616369.4:75 BC004519:75 ENST00000564859.1:127 KJ903209:141 CU678744:141 ENST00000536050.5:332 AK302557:332 |
TATA-Box annotation
| Distance to TSS: | -17 |
|---|---|
| Nearest PromoterID: | NM_001324171 |
| Entrez ID: | 79726 |
| Nearest Unigene: | Hs.280951 |
| Nearest Refseq: | NM_030581 |
| Nearest Ensembl: | ENSG00000103091 |
| Gene Name: | WD repeat domain 59 |
| Gene Alias: | CDW12|FP977|p90-120 |
| Gene Description: | WD repeat domain 59 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
