Difference between revisions of "TSS:Hg 158412.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000602758 | + | |all_trans=ENST00000602758.1:3 AB115764:-46 ENST00000602675.5:62 ENST00000284245.9:-73 NM_206967:-73 NR_161454:-73 NR_161453:-73 NR_161452:-73 AB115765:-80 ENST00000602914.1:-82 ENST00000602766.1:-89 ENST00000602719.5:-106 |
|chr=chr16 | |chr=chr16 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=3 | |distance=3 | ||
| − | |distance_to_tss= | + | |distance_to_tss=78 |
|end=85751023 | |end=85751023 | ||
|end_of_center_position=85751018 | |end_of_center_position=85751018 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_206967 | |nearest_refseq=NM_206967 | ||
|nearest_unigene=Hs.461655 | |nearest_unigene=Hs.461655 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=85751012 | |start=85751012 | ||
|start_of_center_position=85751017 | |start_of_center_position=85751017 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000602758 | + | |transcript_name=ENST00000602758.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_158412.1 | |tss_id=hg_158412.1 | ||
Revision as of 14:42, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 85751017 |
|---|---|
| End of the center position in the TSS region: | 85751018 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000602758.1 |
|---|---|
| Distance: | 3 |
| Num_trans: | 12 |
| All_trans: | ENST00000602758.1:3 AB115764:-46 ENST00000602675.5:62 ENST00000284245.9:-73 NM_206967:-73 NR_161454:-73 NR_161453:-73 NR_161452:-73 AB115765:-80 ENST00000602914.1:-82 ENST00000602766.1:-89 ENST00000602719.5:-106 |
TATA-Box annotation
| Distance to TSS: | 78 |
|---|---|
| Nearest PromoterID: | NM_206967 |
| Entrez ID: | 404550 |
| Nearest Unigene: | Hs.461655 |
| Nearest Refseq: | NM_206967 |
| Nearest Ensembl: | ENSG00000154102 |
| Gene Name: | chromosome 16 open reading frame 74 |
| Gene Alias: | - |
| Gene Description: | chromosome 16 open reading frame 74 |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.800995 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
