Difference between revisions of "TSS:Hg 159282.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000571877.1:-466 | + | |all_trans=LF326382:0 MA561959:0 ENST00000571877.1:-466 AF258568:-466 LF326381:500 MA561958:500 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-2854 |
|end=7586958 | |end=7586958 | ||
|end_of_center_position=7586947 | |end_of_center_position=7586947 | ||
| Line 12: | Line 12: | ||
|gene_description=uncharacterized LOC100996842 | |gene_description=uncharacterized LOC100996842 | ||
|gene_id=9526 | |gene_id=9526 | ||
| − | |gene_name= | + | |gene_name=LOC100996842 |
|gene_source=HGNC:7207 | |gene_source=HGNC:7207 | ||
|gene_symbol=MPDU1 | |gene_symbol=MPDU1 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001322800 | |nearest_refseq=NM_001322800 | ||
|nearest_unigene=Hs.720681 | |nearest_unigene=Hs.720681 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=7586934 | |start=7586934 | ||
|start_of_center_position=7586946 | |start_of_center_position=7586946 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=LF326382 MA561959 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_159282.1 | |tss_id=hg_159282.1 | ||
Latest revision as of 15:02, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 7586946 |
|---|---|
| End of the center position in the TSS region: | 7586947 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF326382 MA561959 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | LF326382:0 MA561959:0 ENST00000571877.1:-466 AF258568:-466 LF326381:500 MA561958:500 |
TATA-Box annotation
| Distance to TSS: | -2854 |
|---|---|
| Nearest PromoterID: | NR_136401 |
| Entrez ID: | 100996842 |
| Nearest Unigene: | Hs.720681 |
| Nearest Refseq: | NM_001322800 |
| Nearest Ensembl: | ENSG00000233223 |
| Gene Name: | LOC100996842 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100996842 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
