Difference between revisions of "TSS:Hg 159729.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000581955 | + | |all_trans=ENST00000581955.1:-364 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance=-364 | |distance=-364 | ||
| − | |distance_to_tss= | + | |distance_to_tss=56204 |
|end=17150134 | |end=17150134 | ||
|end_of_center_position=17150129 | |end_of_center_position=17150129 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_178836 | |nearest_refseq=NM_178836 | ||
|nearest_unigene=Hs.729079 | |nearest_unigene=Hs.729079 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=17150123 | |start=17150123 | ||
|start_of_center_position=17150128 | |start_of_center_position=17150128 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-93(TACTATTAAAAG,-,0.00) |
| − | |transcript_name=ENST00000581955 | + | |transcript_name=ENST00000581955.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_159729.1 | |tss_id=hg_159729.1 | ||
Revision as of 15:12, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 17150128 |
|---|---|
| End of the center position in the TSS region: | 17150129 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000581955.1 |
|---|---|
| Distance: | -364 |
| Num_trans: | 1 |
| All_trans: | ENST00000581955.1:-364 |
TATA-Box annotation
| Distance to TSS: | 56204 |
|---|---|
| Nearest PromoterID: | NM_178836 |
| Entrez ID: | 201164 |
| Nearest Unigene: | Hs.729079 |
| Nearest Refseq: | NM_178836 |
| Nearest Ensembl: | ENSG00000179598 |
| Gene Name: | myosin phosphatase Rho interacting protein |
| Gene Alias: | ZUC |
| Gene Description: | phospholipase D family member 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -93(TACTATTAAAAG,-,0.00) |
