Difference between revisions of "TSS:Hg 163659.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AK299909:0 ENST00000571945.5 | + | |all_trans=NM_001282149:0 AK299909:0 ENST00000571945.5:-106 ENST00000536794.6:-130 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=6 |
|end=1079016 | |end=1079016 | ||
|end_of_center_position=1078988 | |end_of_center_position=1078988 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=MDB | |gene_alias=MDB | ||
| − | |gene_description= | + | |gene_description=ABR activator of RhoGEF and GTPase |
|gene_id=29 | |gene_id=29 | ||
| − | |gene_name= | + | |gene_name=ABR activator of RhoGEF and GTPase |
|gene_source=HGNC:81 | |gene_source=HGNC:81 | ||
|gene_symbol=ABR | |gene_symbol=ABR | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001092 | |nearest_refseq=NM_001092 | ||
|nearest_unigene=Hs.159306 | |nearest_unigene=Hs.159306 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=1078958 | |start=1078958 | ||
|start_of_center_position=1078987 | |start_of_center_position=1078987 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=AK299909 | + | |transcript_name=NM_001282149 AK299909 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_163659.1 | |tss_id=hg_163659.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q6ZT60 |
}} | }} | ||
Revision as of 16:43, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1078987 |
|---|---|
| End of the center position in the TSS region: | 1078988 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001282149 AK299909 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | NM_001282149:0 AK299909:0 ENST00000571945.5:-106 ENST00000536794.6:-130 |
TATA-Box annotation
| Distance to TSS: | 6 |
|---|---|
| Nearest PromoterID: | NM_001282149 |
| Entrez ID: | 29 |
| Nearest Unigene: | Hs.159306 |
| Nearest Refseq: | NM_001092 |
| Nearest Ensembl: | ENSG00000159842 |
| Gene Name: | ABR activator of RhoGEF and GTPase |
| Gene Alias: | MDB |
| Gene Description: | ABR activator of RhoGEF and GTPase |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
