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Difference between revisions of "TSS:Hg 163686.1"

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Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
|all_trans=AK126882:-234 ENST00000544583.6:-286 NM_001159746:-286 uc002fse.5:-286 AK124547:-286
+
|all_trans=AK126882:-234 NM_001159746:-236 ENST00000544583.6:-286 AK124547:-286
 
|chr=chr17
 
|chr=chr17
 
|cpg_percent=0.05
 
|cpg_percent=0.05
 
|distance=-234
 
|distance=-234
|distance_to_tss=294
+
|distance_to_tss=244
 
|end=1187036
 
|end=1187036
 
|end_of_center_position=1187029
 
|end_of_center_position=1187029
Line 10: Line 10:
 
|gc_percent=0.676617
 
|gc_percent=0.676617
 
|gene_alias=MDB
 
|gene_alias=MDB
|gene_description=active BCR-related
+
|gene_description=ABR activator of RhoGEF and GTPase
 
|gene_id=29
 
|gene_id=29
|gene_name=active BCR-related
+
|gene_name=ABR activator of RhoGEF and GTPase
 
|gene_source=HGNC:81
 
|gene_source=HGNC:81
 
|gene_symbol=ABR
 
|gene_symbol=ABR
Line 22: Line 22:
 
|nearest_refseq=NM_001092
 
|nearest_refseq=NM_001092
 
|nearest_unigene=Hs.159306
 
|nearest_unigene=Hs.159306
|num_trans=5
+
|num_trans=4
 
|species=human
 
|species=human
 
|start=1187020
 
|start=1187020

Revision as of 16:44, 16 June 2021

Basic information about the TSS


TSS ID:hg_163686.1
Species:human
Chr:chr17
TSS Classification:yes
Start:1187020
End:1187036
Strand:-
TSS Score:1
Start of the center position in the TSS region:1187028
End of the center position in the TSS region:1187029



Gene and protein annotation


Transcript_name:AK126882
Distance:-234
GeneID:29
HGNC/MGI_ID:HGNC:81
UniProt_ID:Q6ZT60
Gene_name:ABR activator of RhoGEF and GTPase
Gene_symbol:ABR
Gene_synonyms:MDB
Gene_source:HGNC:81



Transcript annotation


Transcript_name:AK126882
Distance:-234
Num_trans:4
All_trans:AK126882:-234 NM_001159746:-236 ENST00000544583.6:-286 AK124547:-286



TATA-Box annotation


Distance to TSS:244
Nearest PromoterID:NM_001159746
Entrez ID:29
Nearest Unigene:Hs.159306
Nearest Refseq:NM_001092
Nearest Ensembl:ENSG00000159842
Gene Name:ABR activator of RhoGEF and GTPase
Gene Alias:MDB
Gene Description:ABR activator of RhoGEF and GTPase
Gene Type:protein-coding
CpG%:0.05
GC%:0.676617
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):