Difference between revisions of "TSS:Hg 163694.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_001322841:-19 NM_001322842:-19 ENST00000574139.6:-35 | ||
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| − | |distance= | + | |distance=-19 |
| − | |distance_to_tss= | + | |distance_to_tss=33 |
|end=1229703 | |end=1229703 | ||
|end_of_center_position=1229689 | |end_of_center_position=1229689 | ||
| Line 9: | Line 10: | ||
|gc_percent=0.716418 | |gc_percent=0.716418 | ||
|gene_alias=MDB | |gene_alias=MDB | ||
| − | |gene_description= | + | |gene_description=ABR activator of RhoGEF and GTPase |
| − | |gene_name=ABR | + | |gene_id=29 |
| + | |gene_name=ABR activator of RhoGEF and GTPase | ||
| + | |gene_source=HGNC:81 | ||
| + | |gene_symbol=ABR | ||
| + | |gene_synonyms=MDB | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:81 | ||
|nearest_ensembl=ENSG00000159842 | |nearest_ensembl=ENSG00000159842 | ||
|nearest_promoter_id=NM_001322841 | |nearest_promoter_id=NM_001322841 | ||
|nearest_refseq=NM_001092 | |nearest_refseq=NM_001092 | ||
|nearest_unigene=Hs.159306 | |nearest_unigene=Hs.159306 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=human | |species=human | ||
|start=1229674 | |start=1229674 | ||
|start_of_center_position=1229688 | |start_of_center_position=1229688 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001322841 NM_001322842 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_163694.1 | |tss_id=hg_163694.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=Q6ZT60 | ||
}} | }} | ||
Revision as of 16:44, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1229688 |
|---|---|
| End of the center position in the TSS region: | 1229689 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001322841 NM_001322842 |
|---|---|
| Distance: | -19 |
| Num_trans: | 3 |
| All_trans: | NM_001322841:-19 NM_001322842:-19 ENST00000574139.6:-35 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_001322841 |
| Entrez ID: | 29 |
| Nearest Unigene: | Hs.159306 |
| Nearest Refseq: | NM_001092 |
| Nearest Ensembl: | ENSG00000159842 |
| Gene Name: | ABR activator of RhoGEF and GTPase |
| Gene Alias: | MDB |
| Gene Description: | ABR activator of RhoGEF and GTPase |
| Gene Type: | protein-coding |
| CpG%: | 0.13 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
