Difference between revisions of "TSS:Hg 167042.1"
From referenceTSS
| Line 2: | Line 2: | ||
|CARPX= | |CARPX= | ||
|HUCEP-15= | |HUCEP-15= | ||
| − | |all_trans=ENST00000575097 | + | |all_trans=ENST00000575097.1:113 |
|chr=chr17 | |chr=chr17 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
|distance=113 | |distance=113 | ||
| − | |distance_to_tss= | + | |distance_to_tss=312480 |
|end=51747914 | |end=51747914 | ||
|end_of_center_position=51747908 | |end_of_center_position=51747908 | ||
| − | |entrez_id= | + | |entrez_id=105371828 |
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=long intergenic non-protein coding RNA 2073 |
|gene_id=56934 | |gene_id=56934 | ||
|gene_name=carbonic anhydrase 10 | |gene_name=carbonic anhydrase 10 | ||
| Line 18: | Line 18: | ||
|gene_symbol=CA10 | |gene_symbol=CA10 | ||
|gene_synonyms=CA-RPX CARPX HUCEP-15 | |gene_synonyms=CA-RPX CARPX HUCEP-15 | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id=HGNC:1369 | |hgnc_mgi_id=HGNC:1369 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_146897 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_146897 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.640153 |
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=51747900 | |start=51747900 | ||
|start_of_center_position=51747907 | |start_of_center_position=51747907 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000575097 | + | |transcript_name=ENST00000575097.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_167042.1 | |tss_id=hg_167042.1 | ||
Revision as of 18:01, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 51747907 |
|---|---|
| End of the center position in the TSS region: | 51747908 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000575097.1 |
|---|---|
| Distance: | 113 |
| Num_trans: | 1 |
| All_trans: | ENST00000575097.1:113 |
TATA-Box annotation
| Distance to TSS: | 312480 |
|---|---|
| Nearest PromoterID: | NR_146897 |
| Entrez ID: | 105371828 |
| Nearest Unigene: | Hs.640153 |
| Nearest Refseq: | NR_146897 |
| Nearest Ensembl: | |
| Gene Name: | carbonic anhydrase 10 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 2073 |
| Gene Type: | ncRNA |
| CpG%: | 0.005 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
