Difference between revisions of "TSS:Hg 169086.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000579794.1:0 | + | |all_trans=ENST00000579794.1:0 AK313050:-161 BC101803:199 BC093837:199 ENST00000450565.8:-233 NM_001099733:-233 NM_001117:249 KJ890631:269 S83513:269 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=239 |
|end=905117 | |end=905117 | ||
|end_of_center_position=905111 | |end_of_center_position=905111 | ||
| Line 12: | Line 12: | ||
|gene_description=adenylate cyclase activating polypeptide 1 | |gene_description=adenylate cyclase activating polypeptide 1 | ||
|gene_id=116 | |gene_id=116 | ||
| − | |gene_name=adenylate cyclase activating polypeptide 1 | + | |gene_name=adenylate cyclase activating polypeptide 1 |
|gene_source=HGNC:241 | |gene_source=HGNC:241 | ||
|gene_symbol=ADCYAP1 | |gene_symbol=ADCYAP1 | ||
| Line 19: | Line 19: | ||
|hgnc_mgi_id=HGNC:241 | |hgnc_mgi_id=HGNC:241 | ||
|nearest_ensembl=ENSG00000141433 | |nearest_ensembl=ENSG00000141433 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001099733 |
|nearest_refseq=NM_001117 | |nearest_refseq=NM_001117 | ||
|nearest_unigene=Hs.531719 | |nearest_unigene=Hs.531719 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=905103 | |start=905103 | ||
|start_of_center_position=905110 | |start_of_center_position=905110 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000579794.1 | + | |transcript_name=ENST00000579794.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_169086.1 | |tss_id=hg_169086.1 | ||
Revision as of 18:48, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 905110 |
|---|---|
| End of the center position in the TSS region: | 905111 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000579794.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000579794.1:0 AK313050:-161 BC101803:199 BC093837:199 ENST00000450565.8:-233 NM_001099733:-233 NM_001117:249 KJ890631:269 S83513:269 |
TATA-Box annotation
| Distance to TSS: | 239 |
|---|---|
| Nearest PromoterID: | NM_001099733 |
| Entrez ID: | 116 |
| Nearest Unigene: | Hs.531719 |
| Nearest Refseq: | NM_001117 |
| Nearest Ensembl: | ENSG00000141433 |
| Gene Name: | adenylate cyclase activating polypeptide 1 |
| Gene Alias: | PACAP |
| Gene Description: | adenylate cyclase activating polypeptide 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.06 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
