Difference between revisions of "TSS:Hg 169177.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|TGIF= | |TGIF= | ||
| − | |all_trans=ENST00000549780.5:-270 | + | |all_trans=ENST00000549780.5:-270 NM_001374396:-338 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
| Line 10: | Line 10: | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.477612 | |gc_percent=0.477612 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4{{!}}TGIF |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=3448775 | |start_of_center_position=3448775 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000549780.5 | + | |transcript_name=ENST00000549780.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_169177.1 | |tss_id=hg_169177.1 | ||
Revision as of 18:50, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 3448775 |
|---|---|
| End of the center position in the TSS region: | 3448776 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000549780.5 |
|---|---|
| Distance: | -270 |
| Num_trans: | 2 |
| All_trans: | ENST00000549780.5:-270 NM_001374396:-338 |
TATA-Box annotation
| Distance to TSS: | -637 |
|---|---|
| Nearest PromoterID: | NM_001278682 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4|TGIF |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.477612 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
