Difference between revisions of "TSS:Hg 171644.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ZNF397OS= | |ZNF397OS= | ||
|ZNF917= | |ZNF917= | ||
| − | |all_trans=ENST00000592598 | + | |all_trans=ENST00000592598.1:-441 |
|chr=chr18 | |chr=chr18 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=-441 | |distance=-441 | ||
| − | |distance_to_tss= | + | |distance_to_tss=22727 |
|end=35267507 | |end=35267507 | ||
|end_of_center_position=35267502 | |end_of_center_position=35267502 | ||
|entrez_id=100101467 | |entrez_id=100101467 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=ZNF-WYM | + | |gene_alias=ZNF-WYM{{!}}ZNF397OS{{!}}ZNF917 |
|gene_description=zinc finger and SCAN domain containing 30 | |gene_description=zinc finger and SCAN domain containing 30 | ||
|gene_id=100101467 | |gene_id=100101467 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:33517 | |hgnc_mgi_id=HGNC:33517 | ||
|nearest_ensembl=ENSG00000186814 | |nearest_ensembl=ENSG00000186814 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001166012 |
|nearest_refseq=NM_001112734 | |nearest_refseq=NM_001112734 | ||
|nearest_unigene=Hs.619840 | |nearest_unigene=Hs.619840 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=35267496 | |start=35267496 | ||
|start_of_center_position=35267501 | |start_of_center_position=35267501 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000592598 | + | |transcript_name=ENST00000592598.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_171644.1 | |tss_id=hg_171644.1 | ||
Revision as of 19:47, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35267501 |
|---|---|
| End of the center position in the TSS region: | 35267502 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000592598.1 |
|---|---|
| Distance: | -441 |
| Num_trans: | 1 |
| All_trans: | ENST00000592598.1:-441 |
TATA-Box annotation
| Distance to TSS: | 22727 |
|---|---|
| Nearest PromoterID: | NM_001166012 |
| Entrez ID: | 100101467 |
| Nearest Unigene: | Hs.619840 |
| Nearest Refseq: | NM_001112734 |
| Nearest Ensembl: | ENSG00000186814 |
| Gene Name: | zinc finger and SCAN domain containing 30 |
| Gene Alias: | ZNF-WYM|ZNF397OS|ZNF917 |
| Gene Description: | zinc finger and SCAN domain containing 30 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
