Difference between revisions of "TSS:Hg 174529.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000599124 | + | |all_trans=ENST00000599124.1:-35 BC053606:-35 ENST00000600871.5:-48 AK301159:-48 ENST00000600519.5:-51 AK074069:-51 ENST00000449408.6:-61 AK298062:-61 NM_001321828:-70 ENST00000597887.5:-72 ENST00000599164.6:-72 NM_001321827:-72 NM_001321826:-72 NM_001363609:-72 AK097121:-76 AK300046:-83 ENST00000601861.5:-101 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 9: | Line 9: | ||
|entrez_id=199786 | |entrez_id=199786 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=BCNP1 | + | |gene_alias=BCNP1{{!}}FAM129C |
| − | |gene_description= | + | |gene_description=niban apoptosis regulator 3 |
|gene_id=199786 | |gene_id=199786 | ||
| − | |gene_name= | + | |gene_name=niban apoptosis regulator 3 |
|gene_source=HGNC:24130 | |gene_source=HGNC:24130 | ||
| − | |gene_symbol= | + | |gene_symbol=NIBAN3 |
|gene_synonyms=BCNP1 FLJ39802 | |gene_synonyms=BCNP1 FLJ39802 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_173544 | |nearest_refseq=NM_173544 | ||
|nearest_unigene=Hs.434133 | |nearest_unigene=Hs.434133 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=17527338 | |start=17527338 | ||
|start_of_center_position=17527340 | |start_of_center_position=17527340 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000599124 | + | |transcript_name=ENST00000599124.1 BC053606 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_174529.1 | |tss_id=hg_174529.1 | ||
Revision as of 20:53, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 17527340 |
|---|---|
| End of the center position in the TSS region: | 17527341 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000599124.1 BC053606 |
|---|---|
| Distance: | -35 |
| Num_trans: | 17 |
| All_trans: | ENST00000599124.1:-35 BC053606:-35 ENST00000600871.5:-48 AK301159:-48 ENST00000600519.5:-51 AK074069:-51 ENST00000449408.6:-61 AK298062:-61 NM_001321828:-70 ENST00000597887.5:-72 ENST00000599164.6:-72 NM_001321827:-72 NM_001321826:-72 NM_001363609:-72 AK097121:-76 AK300046:-83 ENST00000601861.5:-101 |
TATA-Box annotation
| Distance to TSS: | 72 |
|---|---|
| Nearest PromoterID: | NM_001321828 |
| Entrez ID: | 199786 |
| Nearest Unigene: | Hs.434133 |
| Nearest Refseq: | NM_173544 |
| Nearest Ensembl: | ENSG00000167483 |
| Gene Name: | niban apoptosis regulator 3 |
| Gene Alias: | BCNP1|FAM129C |
| Gene Description: | niban apoptosis regulator 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
