Difference between revisions of "TSS:Hg 175330.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000601669.6 | + | |all_trans=ENST00000601669.6:-3 ENST00000441942.6:4 ENST00000602468.5:-23 ENST00000602653.5:37 ENST00000602796.5:38 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_040046 | |nearest_refseq=NR_040046 | ||
|nearest_unigene=Hs.570008 | |nearest_unigene=Hs.570008 | ||
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=35399533 | |start=35399533 | ||
|start_of_center_position=35399538 | |start_of_center_position=35399538 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000601669.6 | + | |transcript_name=ENST00000601669.6 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_175330.1 | |tss_id=hg_175330.1 | ||
Revision as of 21:11, 16 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 35399538 |
|---|---|
| End of the center position in the TSS region: | 35399539 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000601669.6 |
|---|---|
| Distance: | -3 |
| Num_trans: | 5 |
| All_trans: | ENST00000601669.6:-3 ENST00000441942.6:4 ENST00000602468.5:-23 ENST00000602653.5:37 ENST00000602796.5:38 |
TATA-Box annotation
| Distance to TSS: | -6068 |
|---|---|
| Nearest PromoterID: | NR_040046 |
| Entrez ID: | 100128682 |
| Nearest Unigene: | Hs.570008 |
| Nearest Refseq: | NR_040046 |
| Nearest Ensembl: | ENSG00000205786 |
| Gene Name: | long intergenic non-protein coding RNA 1531 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 1531 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
