Difference between revisions of "TSS:Hg 179107.1"
From referenceTSS
| Line 2: | Line 2: | ||
|GLP-1= | |GLP-1= | ||
|GLP1= | |GLP1= | ||
| − | |all_trans=ENST00000480726 | + | |all_trans=ENST00000480726.1:29 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| Line 11: | Line 11: | ||
|entrez_id=100125288 | |entrez_id=100125288 | ||
|gc_percent=0.616915 | |gc_percent=0.616915 | ||
| − | |gene_alias=GATAD3 | + | |gene_alias=GATAD3{{!}}GLP-1{{!}}GLP1 |
| − | |gene_description= | + | |gene_description=zinc finger GATA like protein 1 |
|gene_id=100125288 | |gene_id=100125288 | ||
| − | |gene_name= | + | |gene_name=zinc finger GATA like protein 1 |
|gene_source=HGNC:37245 | |gene_source=HGNC:37245 | ||
|gene_symbol=ZGLP1 | |gene_symbol=ZGLP1 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_001103167 | |nearest_refseq=NM_001103167 | ||
|nearest_unigene=Hs.709296 | |nearest_unigene=Hs.709296 | ||
| − | |num_trans= | + | |num_trans=1 |
|species=human | |species=human | ||
|start=10305639 | |start=10305639 | ||
|start_of_center_position=10305648 | |start_of_center_position=10305648 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-100(CCATTTAGAGCC,+,0.00) |
| − | |transcript_name=ENST00000480726 | + | |transcript_name=ENST00000480726.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_179107.1 | |tss_id=hg_179107.1 | ||
Revision as of 22:38, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 10305648 |
|---|---|
| End of the center position in the TSS region: | 10305649 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000480726.1 |
|---|---|
| Distance: | 29 |
| Num_trans: | 1 |
| All_trans: | ENST00000480726.1:29 |
TATA-Box annotation
| Distance to TSS: | 3909 |
|---|---|
| Nearest PromoterID: | NM_001103167 |
| Entrez ID: | 100125288 |
| Nearest Unigene: | Hs.709296 |
| Nearest Refseq: | NM_001103167 |
| Nearest Ensembl: | ENSG00000220201 |
| Gene Name: | zinc finger GATA like protein 1 |
| Gene Alias: | GATAD3|GLP-1|GLP1 |
| Gene Description: | zinc finger GATA like protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -100(CCATTTAGAGCC,+,0.00) |
