Difference between revisions of "TSS:Hg 180484.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000392227.2:37 NR_024562:37 | + | |all_trans=ENST00000668923.1:34 ENST00000392227.2:37 NR_024562:37 AK295317:37 ENST00000653822.1:46 ENST00000666194.1:66 NR_024561:70 AK124779:70 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=34 |
|distance_to_tss=-42 | |distance_to_tss=-42 | ||
|end=35106351 | |end=35106351 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_024561 | |nearest_refseq=NR_024561 | ||
|nearest_unigene=Hs.633989 | |nearest_unigene=Hs.633989 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=35106340 | |start=35106340 | ||
|start_of_center_position=35106345 | |start_of_center_position=35106345 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000668923.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_180484.1 | |tss_id=hg_180484.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 23:09, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 35106345 |
|---|---|
| End of the center position in the TSS region: | 35106346 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000668923.1 |
|---|---|
| Distance: | 34 |
| Num_trans: | 8 |
| All_trans: | ENST00000668923.1:34 ENST00000392227.2:37 NR_024562:37 AK295317:37 ENST00000653822.1:46 ENST00000666194.1:66 NR_024561:70 AK124779:70 |
TATA-Box annotation
| Distance to TSS: | -42 |
|---|---|
| Nearest PromoterID: | NR_024562 |
| Entrez ID: | 100128675 |
| Nearest Unigene: | Hs.633989 |
| Nearest Refseq: | NR_024561 |
| Nearest Ensembl: | ENSG00000227392 |
| Gene Name: | HPN antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | HPN antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.035 |
| GC%: | 0.651741 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
