Difference between revisions of "TSS:Hg 184027.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000398022. | + | |all_trans=ENST00000398022.7:187 NM_014742:187 AK294980:187 AK126534:187 ENST00000442842.5:190 ENST00000450829.5:201 NM_001363731:201 AK302439:201 AK296500:201 BC021107:203 ENST00000217315.9:209 D87444:209 ENST00000417389.1:240 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| − | |distance= | + | |distance=187 |
| − | |distance_to_tss= | + | |distance_to_tss=-203 |
|end=32109527 | |end=32109527 | ||
|end_of_center_position=32109512 | |end_of_center_position=32109512 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_014742 | |nearest_refseq=NM_014742 | ||
|nearest_unigene=Hs.654665 | |nearest_unigene=Hs.654665 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=32109495 | |start=32109495 | ||
|start_of_center_position=32109511 | |start_of_center_position=32109511 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000398022. | + | |transcript_name=ENST00000398022.7 NM_014742 AK294980 AK126534 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_184027.1 | |tss_id=hg_184027.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=A0A024QYR3 Q92544 | + | |uniprot_id=A0A024QYR3 Q6ZTK5 Q92544 |
}} | }} | ||
Revision as of 00:31, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 32109511 |
|---|---|
| End of the center position in the TSS region: | 32109512 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000398022.7 NM_014742 AK294980 AK126534 |
|---|---|
| Distance: | 187 |
| Num_trans: | 13 |
| All_trans: | ENST00000398022.7:187 NM_014742:187 AK294980:187 AK126534:187 ENST00000442842.5:190 ENST00000450829.5:201 NM_001363731:201 AK302439:201 AK296500:201 BC021107:203 ENST00000217315.9:209 D87444:209 ENST00000417389.1:240 |
TATA-Box annotation
| Distance to TSS: | -203 |
|---|---|
| Nearest PromoterID: | NM_014742 |
| Entrez ID: | 9777 |
| Nearest Unigene: | Hs.654665 |
| Nearest Refseq: | NM_014742 |
| Nearest Ensembl: | ENSG00000101337 |
| Gene Name: | transmembrane 9 superfamily member 4 |
| Gene Alias: | dJ836N17.2 |
| Gene Description: | transmembrane 9 superfamily member 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
