Difference between revisions of "TSS:Hg 18564.1"
From referenceTSS
| Line 2: | Line 2: | ||
|TDH2A= | |TDH2A= | ||
|TPX= | |TPX= | ||
| − | |all_trans=Y00406:-66 X17358:-91 ENST00000382201.7 | + | |all_trans=Y00406:-66 X17358:-91 ENST00000382201.7:-93 J02969:-93 J02970:-93 M17755:-109 ENST00000329066.9:-110 NM_001206744:-110 BC095448:-110 ENST00000539820.5:-112 ENST00000382269.7:-112 ENST00000345913.8:-112 NM_001206745:-112 NM_175719:-112 NM_000547:-112 BC063107:-112 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=-66 | |distance=-66 | ||
| − | |distance_to_tss= | + | |distance_to_tss=121 |
|end=1413595 | |end=1413595 | ||
|end_of_center_position=1413584 | |end_of_center_position=1413584 | ||
|entrez_id=7173 | |entrez_id=7173 | ||
|gc_percent=0.422886 | |gc_percent=0.422886 | ||
| − | |gene_alias=MSA | + | |gene_alias=MSA{{!}}TDH2A{{!}}TPX |
|gene_description=thyroid peroxidase | |gene_description=thyroid peroxidase | ||
|gene_id=7173 | |gene_id=7173 | ||
| Line 21: | Line 21: | ||
|hgnc_mgi_id=HGNC:12015 | |hgnc_mgi_id=HGNC:12015 | ||
|nearest_ensembl=ENSG00000115705 | |nearest_ensembl=ENSG00000115705 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001206744 |
|nearest_refseq=NM_000547 | |nearest_refseq=NM_000547 | ||
|nearest_unigene=Hs.467554 | |nearest_unigene=Hs.467554 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=1413572 | |start=1413572 | ||
Revision as of 01:08, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1413583 |
|---|---|
| End of the center position in the TSS region: | 1413584 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | Y00406 |
|---|---|
| Distance: | -66 |
| Num_trans: | 16 |
| All_trans: | Y00406:-66 X17358:-91 ENST00000382201.7:-93 J02969:-93 J02970:-93 M17755:-109 ENST00000329066.9:-110 NM_001206744:-110 BC095448:-110 ENST00000539820.5:-112 ENST00000382269.7:-112 ENST00000345913.8:-112 NM_001206745:-112 NM_175719:-112 NM_000547:-112 BC063107:-112 |
TATA-Box annotation
| Distance to TSS: | 121 |
|---|---|
| Nearest PromoterID: | NM_001206744 |
| Entrez ID: | 7173 |
| Nearest Unigene: | Hs.467554 |
| Nearest Refseq: | NM_000547 |
| Nearest Ensembl: | ENSG00000115705 |
| Gene Name: | thyroid peroxidase |
| Gene Alias: | MSA|TDH2A|TPX |
| Gene Description: | thyroid peroxidase |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.422886 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
