Difference between revisions of "TSS:Hg 1866.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000454613.1:27 NR_034182 | + | |all_trans=ENST00000454613.1:27 NR_034182:27 AK057725:27 ENST00000414763.1:37 ENST00000414532.6:-229 BC044253:293 ENST00000649861.1:429 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_034182 | |nearest_refseq=NR_034182 | ||
|nearest_unigene=Hs.659751 | |nearest_unigene=Hs.659751 | ||
| − | |num_trans= | + | |num_trans=7 |
|species=human | |species=human | ||
|start=30718732 | |start=30718732 | ||
|start_of_center_position=30718738 | |start_of_center_position=30718738 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000454613.1 NR_034182 | + | |transcript_name=ENST00000454613.1 NR_034182 AK057725 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_1866.1 | |tss_id=hg_1866.1 | ||
Revision as of 01:31, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 30718738 |
|---|---|
| End of the center position in the TSS region: | 30718739 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000454613.1 NR_034182 AK057725 |
|---|---|
| Distance: | 27 |
| Num_trans: | 7 |
| All_trans: | ENST00000454613.1:27 NR_034182:27 AK057725:27 ENST00000414763.1:37 ENST00000414532.6:-229 BC044253:293 ENST00000649861.1:429 |
TATA-Box annotation
| Distance to TSS: | -33 |
|---|---|
| Nearest PromoterID: | NR_034182 |
| Entrez ID: | 100129196 |
| Nearest Unigene: | Hs.659751 |
| Nearest Refseq: | NR_034182 |
| Nearest Ensembl: | ENSG00000186056 |
| Gene Name: | MATN1 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | MATN1 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.115 |
| GC%: | 0.716418 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
