Difference between revisions of "TSS:Hg 187458.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000409554.1:2 | + | |all_trans=ENST00000409554.1:2 ENST00000651288.1:92 ENST00000504988.1:328 AK311906:330 ENST00000354280.9:353 NM_001198986:353 NM_020398:353 NM_001302861:353 AK301937:353 BC003675:353 GQ891395:365 BC044829:365 BC053369:370 AL118493:374 AF286370:376 AF286368:376 CU690968:396 HQ448506:396 KJ894392:396 ENST00000496898.1:397 AK126022:397 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=2 | |distance=2 | ||
| − | |distance_to_tss=- | + | |distance_to_tss=-357 |
|end=45547763 | |end=45547763 | ||
|end_of_center_position=45547759 | |end_of_center_position=45547759 | ||
| − | |entrez_id= | + | |entrez_id=57119 |
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=SPINLW1 | + | |gene_alias=CT71{{!}}CT72{{!}}SPINLW1{{!}}WAP7{{!}}WFDC7{{!}}dJ461P17.2 |
| − | |gene_description= | + | |gene_description=epididymal peptidase inhibitor |
|gene_id=57119 | |gene_id=57119 | ||
|gene_name=epididymal peptidase inhibitor | |gene_name=epididymal peptidase inhibitor | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:15932 | |hgnc_mgi_id=HGNC:15932 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000101448 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_020398 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_020398 |
|nearest_unigene=Hs.121084 | |nearest_unigene=Hs.121084 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=45547753 | |start=45547753 | ||
|start_of_center_position=45547758 | |start_of_center_position=45547758 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000409554 | + | |transcript_name=ENST00000409554.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_187458.1 | |tss_id=hg_187458.1 | ||
Revision as of 01:50, 17 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 45547758 |
|---|---|
| End of the center position in the TSS region: | 45547759 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000409554.1 |
|---|---|
| Distance: | 2 |
| Num_trans: | 21 |
| All_trans: | ENST00000409554.1:2 ENST00000651288.1:92 ENST00000504988.1:328 AK311906:330 ENST00000354280.9:353 NM_001198986:353 NM_020398:353 NM_001302861:353 AK301937:353 BC003675:353 GQ891395:365 BC044829:365 BC053369:370 AL118493:374 AF286370:376 AF286368:376 CU690968:396 HQ448506:396 KJ894392:396 ENST00000496898.1:397 AK126022:397 |
TATA-Box annotation
| Distance to TSS: | -357 |
|---|---|
| Nearest PromoterID: | NM_020398 |
| Entrez ID: | 57119 |
| Nearest Unigene: | Hs.121084 |
| Nearest Refseq: | NM_020398 |
| Nearest Ensembl: | ENSG00000101448 |
| Gene Name: | epididymal peptidase inhibitor |
| Gene Alias: | CT71|CT72|SPINLW1|WAP7|WFDC7|dJ461P17.2 |
| Gene Description: | epididymal peptidase inhibitor |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
