Difference between revisions of "TSS:Hg 187479.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000465935 | + | |all_trans=ENST00000465935.1:-12 ENST00000490877.1:-19 ENST00000471401.5:-25 ENST00000243938.9:-27 NM_080614:-27 ENST00000493693.5:-44 BC026014:-44 ENST00000462017.5:-47 ENST00000487343.5:-47 BC102013:-47 BC102014:-47 AF488306:-52 ENST00000467679.5:-59 ENST00000481847.5:-76 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|dJ447F3.3= | |dJ447F3.3= | ||
|distance=-12 | |distance=-12 | ||
| − | |distance_to_tss= | + | |distance_to_tss=33 |
|end=45791856 | |end=45791856 | ||
|end_of_center_position=45791851 | |end_of_center_position=45791851 | ||
|entrez_id=140686 | |entrez_id=140686 | ||
|gc_percent=0.656716 | |gc_percent=0.656716 | ||
| − | |gene_alias=WAP14 | + | |gene_alias=WAP14{{!}}dJ447F3.3 |
|gene_description=WAP four-disulfide core domain 3 | |gene_description=WAP four-disulfide core domain 3 | ||
|gene_id=140686 | |gene_id=140686 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_080614 | |nearest_refseq=NM_080614 | ||
|nearest_unigene=Hs.419126 | |nearest_unigene=Hs.419126 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=45791844 | |start=45791844 | ||
|start_of_center_position=45791850 | |start_of_center_position=45791850 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000465935 | + | |transcript_name=ENST00000465935.1 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_187479.1 | |tss_id=hg_187479.1 | ||
Revision as of 01:51, 17 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 45791850 |
|---|---|
| End of the center position in the TSS region: | 45791851 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000465935.1 |
|---|---|
| Distance: | -12 |
| Num_trans: | 14 |
| All_trans: | ENST00000465935.1:-12 ENST00000490877.1:-19 ENST00000471401.5:-25 ENST00000243938.9:-27 NM_080614:-27 ENST00000493693.5:-44 BC026014:-44 ENST00000462017.5:-47 ENST00000487343.5:-47 BC102013:-47 BC102014:-47 AF488306:-52 ENST00000467679.5:-59 ENST00000481847.5:-76 |
TATA-Box annotation
| Distance to TSS: | 33 |
|---|---|
| Nearest PromoterID: | NM_080614 |
| Entrez ID: | 140686 |
| Nearest Unigene: | Hs.419126 |
| Nearest Refseq: | NM_080614 |
| Nearest Ensembl: | ENSG00000124116 |
| Gene Name: | WAP four-disulfide core domain 3 |
| Gene Alias: | WAP14|dJ447F3.3 |
| Gene Description: | WAP four-disulfide core domain 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.656716 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
