Difference between revisions of "TSS:Hg 187497.1"
From referenceTSS
| Line 5: | Line 5: | ||
|PTE1= | |PTE1= | ||
|PTE2= | |PTE2= | ||
| − | |all_trans=ENST00000217455. | + | |all_trans=ENST00000217455.9:0 ENST00000461272.5:0 ENST00000488679.5:0 ENST00000493118.5:0 ENST00000483141.1:0 ENST00000484783.1:0 ENST00000486165.5:0 ENST00000481938.5:0 NM_005469:0 X86032:0 AK056668:0 AK298783:0 AK296973:0 AK292494:0 AF014404:9 BC117157:17 BC117155:17 HQ258192:39 KJ892892:39 AF124264:39 CR541771:39 CR541778:39 ENST00000426915.1:45 ENST00000457981.5:158 ENST00000652771.1:430 |
|chr=chr20 | |chr=chr20 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=7 |
|end=45857417 | |end=45857417 | ||
|end_of_center_position=45857386 | |end_of_center_position=45857386 | ||
|entrez_id=10005 | |entrez_id=10005 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=HNAACTE | + | |gene_alias=HNAACTE{{!}}NAP1{{!}}PTE-1{{!}}PTE-2{{!}}PTE1{{!}}PTE2{{!}}hACTE-III{{!}}hTE |
|gene_description=acyl-CoA thioesterase 8 | |gene_description=acyl-CoA thioesterase 8 | ||
|gene_id=10005 | |gene_id=10005 | ||
| Line 29: | Line 29: | ||
|nearest_refseq=NM_005469 | |nearest_refseq=NM_005469 | ||
|nearest_unigene=Hs.444776 | |nearest_unigene=Hs.444776 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=45857353 | |start=45857353 | ||
|start_of_center_position=45857385 | |start_of_center_position=45857385 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000217455. | + | |transcript_name=ENST00000217455.9 ENST00000461272.5 ENST00000488679.5 ENST00000493118.5 ENST00000483141.1 ENST00000484783.1 ENST00000486165.5 ENST00000481938.5 NM_005469 X86032 AK056668 AK298783 AK296973 AK292494 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_187497.1 | |tss_id=hg_187497.1 | ||
Revision as of 01:51, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45857385 |
|---|---|
| End of the center position in the TSS region: | 45857386 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000217455.9 ENST00000461272.5 ENST00000488679.5 ENST00000493118.5 ENST00000483141.1 ENST00000484783.1 ENST00000486165.5 ENST00000481938.5 NM_005469 X86032 AK056668 AK298783 AK296973 AK292494 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | ENST00000217455.9:0 ENST00000461272.5:0 ENST00000488679.5:0 ENST00000493118.5:0 ENST00000483141.1:0 ENST00000484783.1:0 ENST00000486165.5:0 ENST00000481938.5:0 NM_005469:0 X86032:0 AK056668:0 AK298783:0 AK296973:0 AK292494:0 AF014404:9 BC117157:17 BC117155:17 HQ258192:39 KJ892892:39 AF124264:39 CR541771:39 CR541778:39 ENST00000426915.1:45 ENST00000457981.5:158 ENST00000652771.1:430 |
TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_005469 |
| Entrez ID: | 10005 |
| Nearest Unigene: | Hs.444776 |
| Nearest Refseq: | NM_005469 |
| Nearest Ensembl: | ENSG00000101473 |
| Gene Name: | acyl-CoA thioesterase 8 |
| Gene Alias: | HNAACTE|NAP1|PTE-1|PTE-2|PTE1|PTE2|hACTE-III|hTE |
| Gene Description: | acyl-CoA thioesterase 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
